Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02972 ATGACAAAGAAGAAGGAAAAGAAAGTGAACGTGTCTGGAAAGCCAAAGCACTCCCTCGATGCGAATAGGAGCAATGATAAAAAGAGCTCTTCAAATTCGCGCAGCGCCGCTACAGTGCGGCGGCTTAATATGTATAATACCAGACCTGTGCGGGATCGTAAAGGGAAAATCTTGAAGAACGAGCTTCAATCAAAGGATTTGCCGAGCACACGAATTCAACCTGACCGCCGATGGTTTGGAAACACCCGGGTTGTAAATCAAAAGGAGCTTGAATTTTTCCGGGAGGAGCTTCAAAATCGCATGTCAAGTAATTACAATGTCATATTGAAAGGAAAGAATCTGCCCATGTCTCTCCTGAACGATCACCAAAAGCAAGCAAGAGTTCACCTTCTTGATAGAGAGCCTTTTGGGGATGCATTTGGACCTAAGACAAAAAGGAAGCGCCCAAACCTTTTGGCAGCAGATTATGAATCCCTAGCTAAGAAAGCTGATGGTTCTCAAGAGGCCTTTGAACAGAAGCATTTTGCTAGTGTATCTGCAGAAGGTAATGATGATGACGGATTTAGGGATTTAGTGCGGCATACTATGTTTGAAAAAGGTCAAAGTAAACGTATATGGGGTGAACTCTACAAAGTCATAGATTCTTCTGATGTTGTTGTCCAGGTTTTAGATGCAAGGGACCCGCAAGGAACAAGATGTTACCATTTAGAGAAGCATTTAAAGGAAAATTGCAAGCACAAGCACATGGTTCTTTTGCTAAACAAGTGTGATTTAATTCCTGCTTGGGCAACAAAGGGGTGGCTTAGAGTTTTGTCCAGAGAGTATCCTACTCTAGCCTTCCATGCAAGCATTAACAAGTCCTTTGGAAAGGGTTCACTACTGTCGGTTTTGAGACAATTTGCCCGATTAAAAAGTGACAAGCAAGCAATTTCTGTTGGATTCATTGGATATCCAAATGTTGGAAAGTCTTCCGTGATCAACACATTACGTACAAAGAATGTCTGCAAGGTTGCTCCAATTCCAGGGGAAACAAAAGTTTGGCAATATATAACTCTTACAAAGAGAATCTTTTTGATTGACTGCCCAGGCGTTGTTTATCAGAGCAAGGATTCTGAAACAGATATTGTGCTGAAGGGCGTGGTACGGGTGACAAACTTGCAAGATGCTTCAGAACATATAGGTGAAGTTTTGAGACGTGTGAAGAAGGAGCATTTGGAAAGAGCATATAAGATATCGCAGTGGGATGATGAGAACGACTTCCTAGTTCAGCTTAGCAAAGCAACGGGCAAACTACTGAAGGGTGGTGAGCCTGACCTGATGACTGCAGCTAAGATGGTACTTCATGACTGGCAGAGGGGCAAGATTCCCTTTTTCGTTCCCCCACCGCGTAAGAACGACTTATCTGAGGAGGAATCCAATGTTAATGGTGTAGATGGTGATGCCGGCGCTGACAGTGATAAGGTATCTGCAGCTCGTAAAGCCATAGAAAACGTTGTTTCAGCTCAGCTGGGTAGAAGTGTGCCGGTTCAGAGGGATTTATTTAGCGAGAAAGAGTTGGAGGAGACTGCAGACCAACTTCCCAACTCTCAGGATAATACTTGTGAAGAGGTTTCAACTCCTAATAGCGAGTCGTCTGAGCAAAGTCCAGTTCAGCTTGGATTGAATGCTGATGAGCAGGTTCCAGCTAGCGAGACATAA 1698 0.4376 MTKKKEKKVNVSGKPKHSLDANRSNDKKSSSNSRSAATVRRLNMYNTRPVRDRKGKILKNELQSKDLPSTRIQPDRRWFGNTRVVNQKELEFFREELQNRMSSNYNVILKGKNLPMSLLNDHQKQARVHLLDREPFGDAFGPKTKRKRPNLLAADYESLAKKADGSQEAFEQKHFASVSAEGNDDDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLEKHLKENCKHKHMVLLLNKCDLIPAWATKGWLRVLSREYPTLAFHASINKSFGKGSLLSVLRQFARLKSDKQAISVGFIGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQSKDSETDIVLKGVVRVTNLQDASEHIGEVLRRVKKEHLERAYKISQWDDENDFLVQLSKATGKLLKGGEPDLMTAAKMVLHDWQRGKIPFFVPPPRKNDLSEEESNVNGVDGDAGADSDKVSAARKAIENVVSAQLGRSVPVQRDLFSEKELEETADQLPNSQDNTCEEVSTPNSESSEQSPVQLGLNADEQVPASET 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02972 565 MobiDBLite consensus disorder prediction 1 42 - -
Accr1g02972 565 Gene3D - 367 459 IPR023179 -
Accr1g02972 565 CDD NGP_1 208 364 IPR024929 GO:0005730
Accr1g02972 565 FunFam Nuclear/nucleolar GTPase 2 205 367 - -
Accr1g02972 565 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 407 IPR027417 -
Accr1g02972 565 Pfam NGP1NT (NUC091) domain 44 168 IPR012971 -
Accr1g02972 565 Gene3D - 196 366 IPR027417 -
Accr1g02972 565 MobiDBLite consensus disorder prediction 507 565 - -
Accr1g02972 565 PANTHER GTP-BINDING PROTEIN-RELATED 28 536 - -
Accr1g02972 565 MobiDBLite consensus disorder prediction 1 24 - -
Accr1g02972 565 FunFam Nucleolar GTP-binding protein 2 369 459 - -
Accr1g02972 565 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 206 367 IPR030378 GO:0005525
Accr1g02972 565 MobiDBLite consensus disorder prediction 525 565 - -
Accr1g02972 565 Pfam 50S ribosome-binding GTPase 312 381 IPR006073 GO:0005525
Accr1g02972 565 PRINTS GTP1/OBG GTP-binding protein family signature 358 373 IPR006073 GO:0005525
Accr1g02972 565 PRINTS GTP1/OBG GTP-binding protein family signature 312 332 IPR006073 GO:0005525
Accr1g02972 565 MobiDBLite consensus disorder prediction 460 485 - -
Accr1g02972 565 MobiDBLite consensus disorder prediction 25 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02972 Accr-Chr1 66456878 66462523 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02972 K14537 - gmx:100781028 914.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g02972 1 66456878 66462523 Accr1g02972 1 66456878 66462523 ECH