Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02971 ATGGATCGGCTGCTAAAAGCTGCAAGAGCATCTGGTTCCCTCAACCTCTCAAATCGCTCACTCAGTGAAGTTCCAAATGAGGTGTACCGGAATCTGGAGGGGGTTGGTGCGGATGATAAGTGGTGGGAGGCCGTGGATCTCCAAAAGCTCATCTTGGCTCATAATGATATTGAATCATTAAAGGAAGATCTTAGAAACTTACTTTCACTAACTGTATTGAACGTTAGCCACAACAGACTTTCTGAGCTTCCAGCTGCACTAGGAGAGCTACATCAGCTAAAATTGTTGGATGTTTCGTTCAATTTGATAAATAAAATGCCAGAGGAAATTGGATCAGCAGCATCACTTGTTAAGCTTGATTTCTCTAACAATCAACTGAAGGAGCTTCCATGCTCACTTGGCCAATGTACTGAATTGTCAGAATTGAAGGGATCGAACAACCTCATTACCAGCTTACCGGATGATTTAGCAAATTGCTCAAAATTGACAAAGCTAGACATGGAGGGAAACAAACTAACAGTGATACCTGAAAACCTCATTTCTTCATGGACCTTGCTTACTGAATTAAATGCATCAAAAAACTTGCTGAATGGCATACCAGCCAGCATTGGAGGTCTTGCTCGTCTAATTCGCCTTGACCTCCATCAGAACAGAATCTCATCAATTCCTTCATCAATCATGGGTTGCCATTCACTTGCAGAGATTTATTTGGGGAATAACAACCTTTCTACTGTTCCAGCAGAGATAGGGACACTCTCACAACTAGGGACTTTAGATCTTCACTCTAACCAGTTGAAGGAGTACCCAGTAGAGGCATGCAAGTTGGGTCTTTTGGTCTTAGATCTTTCAAACAATTCATTGAGTGGTTTACCTGCTGAATTGGGCAAGATGACTACCTTGAGGAAACTTTTGCTTATGGGCAATCCTTTGCGGACTCTGCGAAGCTCATTAGTCTCTGGACCTACAACAGCACTACTGAAGTTTCTTCGAAGTAGGCTTTCTGAGGTTGAAGAGTCTGAATCTTCAATCAGTACAAAAGAGGATGTCATCGTAAAGGCTACTAGATTGTCAATCTCTTCAAAGGAGCTTTCTTTGGAAGGTCTGGGGTTGAATGCCGTTCCATCAGAAATATGGGAATCAGGGGAGATAATAAAAGTAAACCTTTCAAGAAATTCCATTGAGGAGTTGCCAGTGGAGCTCTCCTCTTGTGTTTCTCTCCAGACACTGATTCTGTCTAAGAATAAAGTTAAAGATTGGCCTGGTTCAATTTTGAAATCACTTTTAAGTCTTTCTTGTTTGAAGCTGGACAACAATCCCCTGAGACAGATTCCTTCAGATGGTTTCAAAACTGTGCCTATGCTTCAGATTCTTGATCTAAGTGGTAATGCAGCTTCACTGCCAAATGGTCCTGCATTCTCTAATATGCCACATCTGCAAGAGCTTTACCTGAGAAGAATGCAACTAAGTGAAGTCCCTTCAGATGTATTGGTGCTATCTCAACTGCGAATCCTGGACTTCAGTCAAAATTCCATTCAATCGATCCCACTGGGGTTCAAAGATCTCACTTCTCTCACGGAGCTTGACCTATCTAACAATAACATCTCCGTCCTTCCCCCTGAACTGGGTTTGCTAGAATCAAGCCTTCAGGCATTGAGACTTGATGGAAATCCTCTCAGAAGCATTCGGAGGACTATCTTGGATAAAGGAACGAAAGCTATTTTGAAATATTTGAAGGACAAATTGCCAGAGGAATAG 1755 0.4211 MDRLLKAARASGSLNLSNRSLSEVPNEVYRNLEGVGADDKWWEAVDLQKLILAHNDIESLKEDLRNLLSLTVLNVSHNRLSELPAALGELHQLKLLDVSFNLINKMPEEIGSAASLVKLDFSNNQLKELPCSLGQCTELSELKGSNNLITSLPDDLANCSKLTKLDMEGNKLTVIPENLISSWTLLTELNASKNLLNGIPASIGGLARLIRLDLHQNRISSIPSSIMGCHSLAEIYLGNNNLSTVPAEIGTLSQLGTLDLHSNQLKEYPVEACKLGLLVLDLSNNSLSGLPAELGKMTTLRKLLLMGNPLRTLRSSLVSGPTTALLKFLRSRLSEVEESESSISTKEDVIVKATRLSISSKELSLEGLGLNAVPSEIWESGEIIKVNLSRNSIEELPVELSSCVSLQTLILSKNKVKDWPGSILKSLLSLSCLKLDNNPLRQIPSDGFKTVPMLQILDLSGNAASLPNGPAFSNMPHLQELYLRRMQLSEVPSDVLVLSQLRILDFSQNSIQSIPLGFKDLTSLTELDLSNNNISVLPPELGLLESSLQALRLDGNPLRSIRRTILDKGTKAILKYLKDKLPEE 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02971 584 Pfam BspA type Leucine rich repeat region (6 copies) 131 195 IPR026906 -
Accr1g02971 584 ProSiteProfiles Leucine-rich repeat profile. 523 544 IPR001611 GO:0005515
Accr1g02971 584 ProSiteProfiles Leucine-rich repeat profile. 208 229 IPR001611 GO:0005515
Accr1g02971 584 Gene3D Ribonuclease Inhibitor 351 466 IPR032675 -
Accr1g02971 584 PRINTS Leucine-rich repeat signature 521 534 - -
Accr1g02971 584 PRINTS Leucine-rich repeat signature 277 290 - -
Accr1g02971 584 PANTHER - 145 329 - -
Accr1g02971 584 ProSiteProfiles Leucine-rich repeat profile. 46 68 IPR001611 GO:0005515
Accr1g02971 584 SMART LRR_bac_2 206 225 - -
Accr1g02971 584 SMART LRR_bac_2 159 178 - -
Accr1g02971 584 SMART LRR_bac_2 136 155 - -
Accr1g02971 584 SMART LRR_bac_2 229 248 - -
Accr1g02971 584 SMART LRR_bac_2 185 202 - -
Accr1g02971 584 SMART LRR_bac_2 521 541 - -
Accr1g02971 584 SMART LRR_bac_2 67 86 - -
Accr1g02971 584 SMART LRR_bac_2 90 109 - -
Accr1g02971 584 SMART LRR_bac_2 274 293 - -
Accr1g02971 584 SMART LRR_bac_2 113 132 - -
Accr1g02971 584 FunFam GH01279p 109 276 - -
Accr1g02971 584 ProSiteProfiles Leucine-rich repeat profile. 69 91 IPR001611 GO:0005515
Accr1g02971 584 ProSiteProfiles Leucine-rich repeat profile. 115 136 IPR001611 GO:0005515
Accr1g02971 584 SUPERFAMILY L domain-like 360 559 - -
Accr1g02971 584 Gene3D Ribonuclease Inhibitor 272 335 IPR032675 -
Accr1g02971 584 Gene3D Ribonuclease Inhibitor 467 580 IPR032675 -
Accr1g02971 584 Gene3D Ribonuclease Inhibitor 173 271 IPR032675 -
Accr1g02971 584 SMART LRR_typ_2 498 520 IPR003591 -
Accr1g02971 584 SMART LRR_typ_2 297 320 IPR003591 -
Accr1g02971 584 SMART LRR_typ_2 521 544 IPR003591 -
Accr1g02971 584 SMART LRR_typ_2 206 229 IPR003591 -
Accr1g02971 584 SMART LRR_typ_2 159 182 IPR003591 -
Accr1g02971 584 SMART LRR_typ_2 252 275 IPR003591 -
Accr1g02971 584 SMART LRR_typ_2 67 89 IPR003591 -
Accr1g02971 584 SMART LRR_typ_2 427 450 IPR003591 -
Accr1g02971 584 SMART LRR_typ_2 114 136 IPR003591 -
Accr1g02971 584 SMART LRR_typ_2 403 426 IPR003591 -
Accr1g02971 584 SMART LRR_typ_2 90 113 IPR003591 -
Accr1g02971 584 SMART LRR_typ_2 230 250 IPR003591 -
Accr1g02971 584 SMART LRR_typ_2 546 568 IPR003591 -
Accr1g02971 584 SMART LRR_typ_2 276 296 IPR003591 -
Accr1g02971 584 SMART LRR_typ_2 475 496 IPR003591 -
Accr1g02971 584 FunFam Leucine-rich repeat-containing protein 40 472 580 - -
Accr1g02971 584 Pfam Leucine rich repeat 476 534 IPR001611 GO:0005515
Accr1g02971 584 Pfam Leucine rich repeat 47 103 IPR001611 GO:0005515
Accr1g02971 584 Pfam Leucine rich repeat 209 265 IPR001611 GO:0005515
Accr1g02971 584 ProSiteProfiles Leucine-rich repeat profile. 500 522 IPR001611 GO:0005515
Accr1g02971 584 SUPERFAMILY L domain-like 14 324 - -
Accr1g02971 584 Gene3D Ribonuclease Inhibitor 1 172 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02971 49 541 Receptor kinase-like Gene Family AT4G08850 29.710 1.75e-31 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02971 - - pcin:129315740 934.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g02971 1 66438827 66453522 Accr1g02971 1 66438827 66453522 ECH