Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02967 ATGAGCAAAGCCAAGGACGAAACAGACGAAGAAGAGCGCTTCTACGAGTCTAATGACCGTCTAGTTTCGTCCTCTTGCTCCTGCTCCACTTCCAACTCCGATGACGACAACAACGACAATGGCTCCAGTCCCAACTCTCCCAATTATGGTTCGGACCAACCCTTCCCCATACCCAAATTCCCGGCGGCCATGTGCAAGTACGATGTTTGGATCTCTGAGCCTTCATCGGTGTCTGAACGCCGGACCCGTCTTCTTCGCGAGATGGGTCTGGCCGGCGACCCGTCATTGTCCAGGGGGAAGGCTGCTTCTGCCGATTATCTTAGAGGAATGGCCAATGGAGAGTTTGGCCGATCGGCTTCTACCGATCACTTGAGTCGCCAACAACAGGGTGAAACTTCTGGTTGCACCGCCGGCATACCCAGATCGAAATCAGATGGTGGAGTGGATCTCGGCGACTTGCAGGTGTGTCCTGGTCAGTCTCGTCGTCGTCATAAAAAGTCTACTTCTTCGGTCTGTTCTTCAATTCCTTCTGTTCACTCGGTCGCTTCAGATAATGGCCCATTTGCAAATAGCCGTAATCAAGTTATTAAGTCGAGGTGCGGCAATGACAATGGATCCCCGATTGCTAATGCCGCCTTCCCCAATAAGCCGCCTTCAGGGAAAAATTGCAGAAGGTTAGATGAAATCCGAAGTGGCTCCTCGAACTTGAGTGTGGATTTCGGCCATTTATCGGTGGAACCAGTTTCCGAGAATGCAGGGTGTGGGGATGTGGAGGGGGGTGCGAACTGTAATGGACTTGACAGGGCCGATGAACAAGTGTGCACCATAAGAGATCTTGATAATGGGAAAGAATTTGTTGTCAAGGAGATTAAGGAAGACGGAACGTGGAACAAATTAAAGGAAGTGGGAACTGGAAGGCAGTTGACCTTGGAGGAGTTTGAGATGACAGTGGGACACTCACCAATTGTTCAAGAATTGATGAGACGACAAAATTTCGAGGAGGGTAACAAGGGCAATGTAGATTCAAATGCAAATATAACTGCCAGTGGCAGTACTGGAGGTGGTACCAAGGTAAAGAAGAAAGGGGGTTGGTTTAAGAGTATAAAGAGTGTTGCCAGCACCATGACGGGTTATAAGGACAGACGGAGTAGTGATGAAAGGGATACCTCGTCAGAAAGGGGTGCGCGGAGGTCAAGTTCTGCTACAGATGAAAGCCAAGATGCTTGTTTACATGGACCTGAAAGAGTACGGGTTAGGCAATATGGAAAGTCATGTAAAGAGTTTACTGCACTCTATAAGAGTCAGGAGGTACAGGCTCATAATGGATCTATATGGAGCATTAAGTTTAGTTTGGACGGGAAATATCTTGCTAGTGCAGGTGAGGATCGTGTAATTCATGTGTGGCAAGTAGTGGAGTCAGAGAGGAAGGCGGAGCTGCTAGTGGAGAAACCAGGCTATGGGAATATGAATACGTTATTGTTTATGAATGGATACACTGAACCAACCTTGTTATCCCCTAGCCAACCGGAGACGAAGGGAAGGGGGAGGTCATCCATCAGCAGAAAATCATTGAGCTTGGACCAGTTAGTTGTGCCAGAAACTATGTTTGCACTAACTGAAAACCCTATTTGCACATTCCAAGGTCATCTTGATGATGTGCTTGATCTATCGTGGTCCAAATCTCAGCACTTGCTTTCCTCTTCAATGGATAAAACAGTGCGGCTGTGGCATTTATCAAGCAAGTCTTGTTTGAAAGTTTTTAAACATAGTGACTATGTAACTTGCATCCAGTTTAATCCCATTGATGATAGATACTTCATTAGCGGGTCTTTGGATTCTAAAGTTCGCATATGGAGTGTTCCTGATCATCAAGTTGTTGATTGGGTTGATTTGCATGAGATGGTCACTGCTGCTTGCTACACACCTGATGGTCAGGCTGCACTGGTTGGTTCATATAAGGGCAGCTGCCATTTGTATGGTACATCTGAAAATAAGTTGCAACGGAAGAGTGAGATTATGCTTCAGAACAAGAAAAAGAAGTCAAATCTCAAGAAAATTACTGGTTTCCAGTTTGCTCCAGGAAGTTCATCAGAATTACTCATAACATCTGCTGATTCTCGAATTCGATTGGTTGATGGTGTTGATCTGGTTCATAAGTTCAAAGGGTTTCGCAACACAAATAGCCAAATTTTAGCCTCGTTCACAGCAAATGGAAAATATATAGTCTCAGCAAGTGAGGATTCCCATGTGTATGTGTGGAAAAATGAAGCTAATTGCAGGCCCAACAGAACCAAAGGTGTCACTGTCACTCAGTCCTATGAACATTTTCATTGTCGAGATGTGTCGGTGGCTATTCCTTGGCCTGGTATGGGTGATGCATGGGAAATGCAAGATCCTTTATCTGGAGAACAAACTGGGGCTGATAGTGTCCTTGATGAGGTCTCATTGGCGAATCATCCCCCAACCCCAGTAGATGAATGTTTTGGTAATGAGGCATCAGGGGCCAACAATGGTTCACTCCATGGAACTATAGCAGGTGCGACGCACAGTTATTTTTTTGACAGAATATCCGCAACATGGCCAGAGGAAAAACTTGTTCTTGCTGCCAGGAGACGAAGCCCTCGAGTTAGTGTGGATATCTCCGACGGGGTTCACCAAAACATGTCAGCCTGGGGACTCGTGATGGTAACTGCTGGCCTTCGAGGGGAGATCCGAGCTTTTCAGAATTTTGGATTGCCAATGCGGATTTAA 2751 0.4631 MSKAKDETDEEERFYESNDRLVSSSCSCSTSNSDDDNNDNGSSPNSPNYGSDQPFPIPKFPAAMCKYDVWISEPSSVSERRTRLLREMGLAGDPSLSRGKAASADYLRGMANGEFGRSASTDHLSRQQQGETSGCTAGIPRSKSDGGVDLGDLQVCPGQSRRRHKKSTSSVCSSIPSVHSVASDNGPFANSRNQVIKSRCGNDNGSPIANAAFPNKPPSGKNCRRLDEIRSGSSNLSVDFGHLSVEPVSENAGCGDVEGGANCNGLDRADEQVCTIRDLDNGKEFVVKEIKEDGTWNKLKEVGTGRQLTLEEFEMTVGHSPIVQELMRRQNFEEGNKGNVDSNANITASGSTGGGTKVKKKGGWFKSIKSVASTMTGYKDRRSSDERDTSSERGARRSSSATDESQDACLHGPERVRVRQYGKSCKEFTALYKSQEVQAHNGSIWSIKFSLDGKYLASAGEDRVIHVWQVVESERKAELLVEKPGYGNMNTLLFMNGYTEPTLLSPSQPETKGRGRSSISRKSLSLDQLVVPETMFALTENPICTFQGHLDDVLDLSWSKSQHLLSSSMDKTVRLWHLSSKSCLKVFKHSDYVTCIQFNPIDDRYFISGSLDSKVRIWSVPDHQVVDWVDLHEMVTAACYTPDGQAALVGSYKGSCHLYGTSENKLQRKSEIMLQNKKKKSNLKKITGFQFAPGSSSELLITSADSRIRLVDGVDLVHKFKGFRNTNSQILASFTANGKYIVSASEDSHVYVWKNEANCRPNRTKGVTVTQSYEHFHCRDVSVAIPWPGMGDAWEMQDPLSGEQTGADSVLDEVSLANHPPTPVDECFGNEASGANNGSLHGTIAGATHSYFFDRISATWPEEKLVLAARRRSPRVSVDISDGVHQNMSAWGLVMVTAGLRGEIRAFQNFGLPMRI 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02967 916 ProSiteProfiles Trp-Asp (WD) repeats profile. 733 754 IPR001680 GO:0005515
Accr1g02967 916 ProSiteProfiles Trp-Asp (WD) repeats profile. 546 586 IPR001680 GO:0005515
Accr1g02967 916 SUPERFAMILY WD40 repeat-like 433 756 IPR036322 GO:0005515
Accr1g02967 916 ProSiteProfiles Trp-Asp (WD) repeats profile. 586 620 IPR001680 GO:0005515
Accr1g02967 916 SMART WD40_4 622 660 IPR001680 GO:0005515
Accr1g02967 916 SMART WD40_4 539 577 IPR001680 GO:0005515
Accr1g02967 916 SMART WD40_4 580 619 IPR001680 GO:0005515
Accr1g02967 916 SMART WD40_4 713 754 IPR001680 GO:0005515
Accr1g02967 916 SMART WD40_4 430 469 IPR001680 GO:0005515
Accr1g02967 916 SMART WD40_4 676 712 IPR001680 GO:0005515
Accr1g02967 916 MobiDBLite consensus disorder prediction 379 400 - -
Accr1g02967 916 MobiDBLite consensus disorder prediction 118 139 - -
Accr1g02967 916 PRINTS G protein beta WD-40 repeat signature 606 620 IPR020472 -
Accr1g02967 916 PRINTS G protein beta WD-40 repeat signature 456 470 IPR020472 -
Accr1g02967 916 PRINTS G protein beta WD-40 repeat signature 564 578 IPR020472 -
Accr1g02967 916 MobiDBLite consensus disorder prediction 115 150 - -
Accr1g02967 916 MobiDBLite consensus disorder prediction 334 359 - -
Accr1g02967 916 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 437 470 - -
Accr1g02967 916 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 546 580 - -
Accr1g02967 916 PANTHER WD REPEAT DOMAIN 44 6 913 IPR040324 -
Accr1g02967 916 Gene3D - 426 777 IPR015943 GO:0005515
Accr1g02967 916 MobiDBLite consensus disorder prediction 336 354 - -
Accr1g02967 916 MobiDBLite consensus disorder prediction 19 52 - -
Accr1g02967 916 MobiDBLite consensus disorder prediction 1 18 - -
Accr1g02967 916 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 586 620 - -
Accr1g02967 916 MobiDBLite consensus disorder prediction 376 411 - -
Accr1g02967 916 MobiDBLite consensus disorder prediction 1 57 - -
Accr1g02967 916 ProSiteProfiles Trp-Asp (WD) repeats profile. 437 478 IPR001680 GO:0005515
Accr1g02967 916 FunFam WD repeat-containing protein 44 527 793 - -
Accr1g02967 916 Pfam WD domain, G-beta repeat 582 619 IPR001680 GO:0005515
Accr1g02967 916 Pfam WD domain, G-beta repeat 436 468 IPR001680 GO:0005515
Accr1g02967 916 Pfam WD domain, G-beta repeat 733 754 IPR001680 GO:0005515
Accr1g02967 916 Pfam WD domain, G-beta repeat 541 576 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02967 Accr-Chr1 66423368 66428412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02967 432 633 Miscellaneous Gene Families AT5G08390 21.463 1.52e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02967 K20241 - qsa:O6P43_000927 1251.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g02967 1 66423368 66428412 Accr1g02967 1 66423368 66428412 ECH