Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02960 ATGGAGGATGAAAATTTGGACACCCCCAAATCCATCCTTTACGAAACCTTGAGTCCCTTCAATCTTTCAACCCCCAACCAGTCTCCGGTTCCCGATGAACTAGAGCCCTATTCTGTTTTCCGGAACGAAATTTCTCTGTCGACCCTTCAATCTCCTTCGGCGGAGACTGCTGCCCCTGATTTCTTTTCTCTTGAAGTTGGCAATGATGATGCTTCTGAGCGAGGATCCCTCTGCTTCCCTTTGCCTGAACCAGTTGCAGCTACTGAGCCGAAGACTCCGGCTCTTGTGCCTGAGCCAAAGCTTGAGAGCAGTTGGTTTCGGGGAAACTGCAAGTTCAGGAGTCCCATGCTTCAGCTGCATAAAGAGATAGTAGATTTTTGTGAATTTTTGTCACCTACTTTGGAAGAAAAAGCTGCACGTGACATGGCAATAGAATCTGTGTTTCAAGTTATAAAACATATATGGCCTCATTCCCAGGTCGAAGTTTTTGGTTCTTTTCGGACTGGGCTATATCTTCCAACTAGTGATGTTGATGTTGTGATTTTGAAGACAGGGTTGCCAAGTCCACAGCTGGGCTTAAATGCACTTTCTCGGGCATTGTCACAAAGGGGCATGGCAAAAAATATCTTGGTCCTCGGAAGGGCTCGAGTGCCAATTATTAAATTTGTTGAAAAGAAAAGTGGTCTTTCATTTGATATAAGTTTTGATGCAGACAATGGACCCAAGGCTGCAGATTATATTCAGGAAGCAGTGGCTAGATGGCCACCACTCCGGCCTTTATGTTTGATTTTGAAAGTGTTCTTGCAGCAAAGAGAACTAAATGAAGTATACTCTGGTGGGATTGGTTCTTATGCCCTCCTTGTCATGCTTATGGCAATGCTACGAAATGTCCGCGAGAGCCAAGTATCTGCAGAACACAACTTGGGAGTCCTTCTGGTGAACTTTTTTGATTTCTATGGACGCAAATTGAACACTGCAGATGTTGGTGTCTCTTGCAATGGGTCAGGCTCCTTTTTCTTGAAGAGCAAGAAGGGGTTTTTAAATAAGGGACGACCGAGTCTTTTGGCAATTGAAGATCCCCAGGCACCTGATAATGACCTTGGGAAGAACTCGTTTAATTATTTCCAGGTTAGGTCGGCTTTTGCAATGGCTTTCAAAACACTGACCAATGCCCATATCATCATGAGCTTAGGCCCTAAAAGAAGTATTCTTGGAACTATAATAAGACCAGATCCTGCATTGCTAGAGCGTAAAGGGGGTTCATATGGGGATGTGACTTTTAATGCCTTGCTTCCCGGAGCAGGCGAGCCATTACAAGTACACTATGGAGGCCAGGATATCTTATGTAATTGGGATTTTGATGATGATGAAGAACCCCTGCCTCGGGGAGGAGATTCTGCTGTGGTTAAAAGCACTTCAGGGAAGAATAGAAAATCTCCATTTAAGGAAAATCCCAAAAAGAAGCTAAAGGAAAATGGGCATATGCGAATGATGAGGGATGGAGAGAATGTCTCGGGGAAAGAGAACAGTATTAAAAAGAAAAGCAGGAGAAAACAATGA 1560 0.441 MEDENLDTPKSILYETLSPFNLSTPNQSPVPDELEPYSVFRNEISLSTLQSPSAETAAPDFFSLEVGNDDASERGSLCFPLPEPVAATEPKTPALVPEPKLESSWFRGNCKFRSPMLQLHKEIVDFCEFLSPTLEEKAARDMAIESVFQVIKHIWPHSQVEVFGSFRTGLYLPTSDVDVVILKTGLPSPQLGLNALSRALSQRGMAKNILVLGRARVPIIKFVEKKSGLSFDISFDADNGPKAADYIQEAVARWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLVMLMAMLRNVRESQVSAEHNLGVLLVNFFDFYGRKLNTADVGVSCNGSGSFFLKSKKGFLNKGRPSLLAIEDPQAPDNDLGKNSFNYFQVRSAFAMAFKTLTNAHIIMSLGPKRSILGTIIRPDPALLERKGGSYGDVTFNALLPGAGEPLQVHYGGQDILCNWDFDDDEEPLPRGGDSAVVKSTSGKNRKSPFKENPKKKLKENGHMRMMRDGENVSGKENSIKKKSRRKQ 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02960 519 FunFam non-canonical poly(A) RNA polymerase PAPD5 132 240 - -
Accr1g02960 519 MobiDBLite consensus disorder prediction 476 510 - -
Accr1g02960 519 PANTHER POLY(A) RNA POLYMERASE 98 473 IPR045862 GO:0043631|GO:1990817
Accr1g02960 519 MobiDBLite consensus disorder prediction 460 519 - -
Accr1g02960 519 Gene3D - 116 390 - -
Accr1g02960 519 Pfam Nucleotidyltransferase domain 147 244 IPR002934 GO:0016779
Accr1g02960 519 Pfam Cid1 family poly A polymerase 307 365 IPR002058 -
Accr1g02960 519 Gene3D Beta Polymerase, domain 2 132 240 IPR043519 -
Accr1g02960 519 SUPERFAMILY PAP/OAS1 substrate-binding domain 255 395 - -
Accr1g02960 519 SUPERFAMILY Nucleotidyltransferase 111 267 IPR043519 -
Accr1g02960 519 CDD NT_PAP_TUTase 139 249 - -
Accr1g02960 519 FunFam Poly(A) RNA polymerase cid14 233 390 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02960 K03514 - gmx:100811320 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g02960 1 66382897 66388890 Accr1g02960 1 66382897 66388890 ECH