Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02903 ATGAGAAACATTTCAAAACCATCATGCTTCATCTTCATTCTTGTTTTTCTAGCAGCAGTTCTTGAGGTTGAAGGTCGTTTTCTGCGAAACAGTTTTTCTTCTTCTTCTGCACTGTTGACTTCAGATGGAGCTGACGAAGGTGATAGTGTTCAACCCCAGAAGAATTCTCACTTGTTTCTCTGGGGGAATACCAGAAAAACCGAACATTCTGAAGAAGAGTGTGAGCAAATGTACGGCTTCTTGCCCTGTTCAACTACCATGTTTGGCCATCTCTTTCTGATTCTGGTTTATGAGTTCTTGTTGTTCCATGGAGAGTCATACTTGGCTTCTGGGGGCGAGCAGATCTTCAAGATTCTTGGCCCTGGCCTTTTTGGTGCAAGTGCGTTTGATCTTCTTGGTGCCCTTCCTGAGTCTCTGATTCTTCTTGTTACTGGGCTTTCCAGAGAGACCAAGGAGAGTGCACAAGAGTATGCTTCCACTGGAGTAGGCATGTTGGCTGGTTCATCCATCTTGCTCCTCACAATAGTTTGGGGAACCTGTGTCATCGCTGGCAGGCAAAACTTGAAAACTGACTCAACGCATAAATCCTCTCATTATTCTAATCCATTAGCTTCAACTCCTACAGAATTATTATCTGGCTTTGGGATTACTATGGATAAAGAGACAAAGGAAATGGCAAGAATCATGGTTCTCTCAGTTATACCACTCCTAATTATGCAGATTCCCAGTGTGTTTCGATTCTCTTCAGTGCTTCGCTCTGTGACCTTGATGATTGCTCTTATTGTTACTGTCATTTTTGTCTTCTCCTACTTCATTTATCAGATATTTAAACCTCATATAGAGAAAACAAGGCTAGAATACATCAAGCATCATGATTTAATAATGAGAATTTTCGAGCATGTTGAAAAGCAAACCCTTCAAAAGATCCTCACTGAGGATGGATCTCCCAATGTGGCAGCCATTAATGGGCTATATAATGAAATCAGTCAGCACGGTGGAGAAAGGGATTTATTAGCTTCTGAAGTGAAAGAACTGCTGCTCAAGAACAAACTAAATGGGGCAAACATCTCAGAGGAACAAGTTGAAGACATGTTAAGAGTGTTTGATCGAAATAATGACCAAATTATAACCAAGGAAGAGTTTGTCACTGGATTAACACAGTGGATTGAGCAAACCAAGCATGCTTTGGATAGACAATACATGCCAAGAAAATCACTCCAGAACATGTATCAGGGTTTTCTGAAGCCATGGTTGGAACACACAAGAAAAGAGCGTGAGTTGAAGGGACGTCTTATATCTGAAATCTTAAGGCATGCTCAGAACGATATAGCTGGGGGGATTCTCAATGATGATGGAACGGCGGATGAGTCTGCTATAAGAAGGCTGTTTGAGGAAGTTGATAGCAATGGAGATAACTGTGTTTCTCAATCCGAGTTAAGGAAACTAGTGACAAGCCTCCACATGGGTAAGGCGGTGGATGAGGATGAAGCAGTCAAGAAAATAATTCAAGATTTTGATATAAACAGTGACAATATGATTAATGAGGAAGAATTTGTGGATGGATTCACAAAATGGCTACTTTCATCTTCCAGCCAAGCTCCACACTCAAAAACTCTACCTCATGTGGAAGAAATCCATCAAACCTGGGAAAATGTGGAAAAGGTTGTGGAAGAGAAGCATCAGCAAAAAGGAATATATGGATGGATCATAGCTATAATGAATGTGGTGCTAGGAATCACTATATTATCAATTCTTGCAGAGCCATTAATAGCAAGTGTCCAGAAATTTTCTGCACAAGCAGGAATCCCATCTTTCTTTGCCTCATTCATTTTAATCCCTCTGGCCACAAATTTTAGAGAAGCAACCTCAGCCATCAAAGAAGCTAGCCACAAGAAGAGAAGTAACACTTCTCATACAATCTATGAGATTTATGGAGCAGTATTTATGAACAACATGCTTGGATTTGCTGCAATTGCGACTCTCATATATGTGAGAGAAATAACGTGGGAATTTTCAGCTGAAGTTCTGGTTGTGGCAATTGTTTGTTCTATAATGGGCCTGTCTGCAAGTTTTCGGCCCAAGTTTTCTCTGTGGACATCCTTCGGAGCTTACCTTTTATATTTGCTGTCTTTAGTTTTGGTTTATGTTCTCAATGATGTTCTTCATTATGAGTGA 2175 0.4055 MRNISKPSCFIFILVFLAAVLEVEGRFLRNSFSSSSALLTSDGADEGDSVQPQKNSHLFLWGNTRKTEHSEEECEQMYGFLPCSTTMFGHLFLILVYEFLLFHGESYLASGGEQIFKILGPGLFGASAFDLLGALPESLILLVTGLSRETKESAQEYASTGVGMLAGSSILLLTIVWGTCVIAGRQNLKTDSTHKSSHYSNPLASTPTELLSGFGITMDKETKEMARIMVLSVIPLLIMQIPSVFRFSSVLRSVTLMIALIVTVIFVFSYFIYQIFKPHIEKTRLEYIKHHDLIMRIFEHVEKQTLQKILTEDGSPNVAAINGLYNEISQHGGERDLLASEVKELLLKNKLNGANISEEQVEDMLRVFDRNNDQIITKEEFVTGLTQWIEQTKHALDRQYMPRKSLQNMYQGFLKPWLEHTRKERELKGRLISEILRHAQNDIAGGILNDDGTADESAIRRLFEEVDSNGDNCVSQSELRKLVTSLHMGKAVDEDEAVKKIIQDFDINSDNMINEEEFVDGFTKWLLSSSSQAPHSKTLPHVEEIHQTWENVEKVVEEKHQQKGIYGWIIAIMNVVLGITILSILAEPLIASVQKFSAQAGIPSFFASFILIPLATNFREATSAIKEASHKKRSNTSHTIYEIYGAVFMNNMLGFAAIATLIYVREITWEFSAEVLVVAIVCSIMGLSASFRPKFSLWTSFGAYLLYLLSLVLVYVLNDVLHYE 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02903 724 Gene3D - 315 392 - -
Accr1g02903 724 SMART efh_1 458 486 IPR002048 GO:0005509
Accr1g02903 724 SMART efh_1 497 525 IPR002048 GO:0005509
Accr1g02903 724 SMART efh_1 360 388 IPR002048 GO:0005509
Accr1g02903 724 Pfam Sodium/calcium exchanger protein 575 715 IPR004837 GO:0016020|GO:0055085
Accr1g02903 724 ProSiteProfiles EF-hand calcium-binding domain profile. 356 391 IPR002048 GO:0005509
Accr1g02903 724 SUPERFAMILY EF-hand 343 526 IPR011992 -
Accr1g02903 724 ProSitePatterns EF-hand calcium-binding domain. 506 518 IPR018247 -
Accr1g02903 724 ProSiteProfiles EF-hand calcium-binding domain profile. 454 489 IPR002048 GO:0005509
Accr1g02903 724 ProSiteProfiles EF-hand calcium-binding domain profile. 493 528 IPR002048 GO:0005509
Accr1g02903 724 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 73 716 IPR004713 GO:0006812|GO:0008324|GO:0016020
Accr1g02903 724 ProSitePatterns EF-hand calcium-binding domain. 369 381 IPR018247 -
Accr1g02903 724 CDD EFh 459 523 IPR002048 GO:0005509
Accr1g02903 724 Pfam EF-hand domain pair 352 385 IPR002048 GO:0005509
Accr1g02903 724 Pfam EF-hand domain pair 457 520 IPR002048 GO:0005509
Accr1g02903 724 ProSitePatterns EF-hand calcium-binding domain. 467 479 IPR018247 -
Accr1g02903 724 Gene3D - 393 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02903 Accr-Chr1 65975935 65980234 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02903 409 718 EF-hand Containing Proteins AT1G53210 41.463 5.70e-63 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02903 - - gmx:100799062 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g02903 1 65975935 65980234 Accr1g02903 1 65975935 65980234 ECH