Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02902 ATGAGAACCATTCTGAGAAAACTATGCTTTGTTTTATTCATTCTTTTTGCAATAACGATTGTGGCTGAAGGGCGTCGTCTGAACTCCAGAACTGTTCATAATGAATTGGTTTCAGATGGAGCTTATGATGATGATGATGAACTTCAACACAATAAAACGTCTAACTTGCTTTTTAAAGGCATTGGATTTGAATCCTATTCTCAAGAAGAAAACTGCAAGCAATTGTATGGGTTCTTGCCTTGTTCAAACAATATTTTTGGGCACCTGTTTCTGATTTTAGTTTATGAGTACTTGTTGTTCCATGGAGAATCGTATTTGGTTGATGGAGGTGAGCAGGTCTTCAAGATTCTTGGTCCTGGGATTTTCGGTGCAAGTGCCTTTCACATCCTTAGTGCCCTTCCCGAGTCCTTAATTCTTCTTGTTTCTGGACTTCTCAGCAGTAAGGAGATTGCACAAGAGTATGCTTTTACAGGAGTTGGCTTATTGGCTGGATCATCCATCTTGCTCTTGACCGTAGTATGGGGAACCTGTGTTATAACTGGGGCCCAACAATTTAACACTGATTCAAGTCTTAGAATCTGTGATGGTTCTAATTCAGTACCTACAAGATTAAAAGCATATTTGACCGGTTATGGCATTACTACAGATTTGGAGACCAGCCAAACTGCAAGAATCATGCTTGTCTCTGTCATACCACTCATAATAATGCAGATCCCCAACTTATTTCAGTTCTCTTCTGGCCCAACAACCGTGACTTTGATAATTGCTCTCATCATTACTGCCATTTTTCTGCTCCTGTACTTCACTTACCAGATTTTTGAACCTTGGATACAGAAAAGAAGATTGGAATATGTGAAACGAAATCATTTACTAGTAAGAATATTACGACATGTTGAGAAGAGTACCCTGGAGAGGATCCTCACCAAGCATGGATCTCCAAATATAAGTGCCATAAGAAGGCTATTTAGAGAAGTGGATCAAAATGAAGACAGTGTTGTATCAGCTTCTGAAGTAAAACAGATCCTGCTTAAGAGCAGATCAAGCGAAAAAAGTATTAGTGAAGAGGAAATAGAAGACATGTTAAGAGTTTTTAACTTGGGTGATGATGACAATAGAATAACTAAGGATGAATTTGTGAGTGGCTTTATAAAATGGCTTGAACAGACCAAGTTTGCCGTGAATAAGCAGTATATGTCAAGGAAATCACTCAAAGAGTTATATCAGGTGTTTGAGCCATGGATTCAGAACAAAAGGAGAGAACAAGAAACGAAGAAACATATCATACCTGAAATTTTTAGGCATATTCAAAGCGATTTGGTTGTCAACCTTCTCACTGAAGACGGCAAACCTGATGAACTTGCTATAAGAAGGTTATTCGACAAGCTGGATACCAATGAAGATAACTGCATTTCTCGGTCTGAGTTAAGAAAACTACTTACAGAGATCAATATTGCTAAAGCATCAATAGATGTGGACGAAGCAGCTAATAAATTCATTGAAGAATTTGACGTTAACAGAGACCATGTGATTAGTGAGGAGGAATTCATCTCTGGGTTCAAAAAATGGCTCAAGTTATCATCATCTCCTTCCAGTCCTGCTCTTCTCTCAGAGTCTGAGCCTGAGTCTGAAGAAGATATACTTCAGATGTGGGAAGAGACAGACATGGTGGTGGAAGAGAATCAAGGAAAAGCGGTGGTTGATAAATCGGTATGGGCATGGGTGAAGGCAATAATAAATGTACTGGTGGGCATTGCCATGTTATCTGTCCTTGCAGAGCCCTTGATAGAGAGTGTACGCAGGTTTTCAGACAGTGCAGGAATTAATCCATTCTTCATCTCATTCATATTGGTCCCATTGGCCACAAATGCTAAAAAGGCAATTTCTGCAGTCAAAGAAGCAAGCAATAAGAAGCCCAGAACTACTTCTCTTACTATTTCTGAGTTATATGGAGGGGTGTTCATGAACAATGTGCTAGGGTTCTTTGCGATATCAGTGTTGATATATGGAAGAGGAATCAGATGGGAATTCTCAGCAGAAGCACTAGTCGTGGCAGTGGTTTGTGTTGTGATGGGGCTTGCTGCTAGTTTTAAATCCACTTTTCCCATATGGTCTTCCTTCTCTGCATGCCTCTTGTACCCATTCTCTCTTGTCCTTGTTTTTCTCCTCAAACATTATCTCTCCTATGTTTAG 2190 0.3963 MRTILRKLCFVLFILFAITIVAEGRRLNSRTVHNELVSDGAYDDDDELQHNKTSNLLFKGIGFESYSQEENCKQLYGFLPCSNNIFGHLFLILVYEYLLFHGESYLVDGGEQVFKILGPGIFGASAFHILSALPESLILLVSGLLSSKEIAQEYAFTGVGLLAGSSILLLTVVWGTCVITGAQQFNTDSSLRICDGSNSVPTRLKAYLTGYGITTDLETSQTARIMLVSVIPLIIMQIPNLFQFSSGPTTVTLIIALIITAIFLLLYFTYQIFEPWIQKRRLEYVKRNHLLVRILRHVEKSTLERILTKHGSPNISAIRRLFREVDQNEDSVVSASEVKQILLKSRSSEKSISEEEIEDMLRVFNLGDDDNRITKDEFVSGFIKWLEQTKFAVNKQYMSRKSLKELYQVFEPWIQNKRREQETKKHIIPEIFRHIQSDLVVNLLTEDGKPDELAIRRLFDKLDTNEDNCISRSELRKLLTEINIAKASIDVDEAANKFIEEFDVNRDHVISEEEFISGFKKWLKLSSSPSSPALLSESEPESEEDILQMWEETDMVVEENQGKAVVDKSVWAWVKAIINVLVGIAMLSVLAEPLIESVRRFSDSAGINPFFISFILVPLATNAKKAISAVKEASNKKPRTTSLTISELYGGVFMNNVLGFFAISVLIYGRGIRWEFSAEALVVAVVCVVMGLAASFKSTFPIWSSFSACLLYPFSLVLVFLLKHYLSYV 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02902 729 CDD EFh 455 520 IPR002048 GO:0005509
Accr1g02902 729 ProSitePatterns EF-hand calcium-binding domain. 463 475 IPR018247 -
Accr1g02902 729 Gene3D - 292 382 - -
Accr1g02902 729 ProSiteProfiles EF-hand calcium-binding domain profile. 490 525 IPR002048 GO:0005509
Accr1g02902 729 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 73 721 IPR004713 GO:0006812|GO:0008324|GO:0016020
Accr1g02902 729 Pfam EF-hand domain pair 454 518 IPR002048 GO:0005509
Accr1g02902 729 SMART efh_1 317 345 IPR002048 GO:0005509
Accr1g02902 729 SMART efh_1 454 482 IPR002048 GO:0005509
Accr1g02902 729 SMART efh_1 494 522 IPR002048 GO:0005509
Accr1g02902 729 Gene3D - 387 525 - -
Accr1g02902 729 ProSiteProfiles EF-hand calcium-binding domain profile. 450 485 IPR002048 GO:0005509
Accr1g02902 729 Pfam Sodium/calcium exchanger protein 579 720 IPR004837 GO:0016020|GO:0055085
Accr1g02902 729 ProSiteProfiles EF-hand calcium-binding domain profile. 313 348 IPR002048 GO:0005509
Accr1g02902 729 SUPERFAMILY EF-hand 316 523 IPR011992 -
Accr1g02902 729 ProSitePatterns EF-hand calcium-binding domain. 503 515 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02902 Accr-Chr1 65971797 65975268 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02902 406 728 EF-hand Containing Proteins AT1G53210 40.597 1.20e-74 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02902 - - gmx:100798009 898.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g02902 1 65971797 65975268 Accr1g02902 1 65971797 65975268 ECH