Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02488 ATGTCGAAAGCTGGAGCCATAGATCTCGCATTGGGCGTGGGTGGAAAGATTGAGAAAGCCGAAGTCCTGTCTGCTGTTGAGAAGTACGAGAAATATCATGTCTGTTATGGAGGTGAGGAGGATGAGAGGAAGTCTAACTACACAGATATGGTTAATAAATACTATGATCTCGTCACTAGCTTTTATGAGTTCGGTTGGGGAGAATCTTTCCATTTTGCACCAAGATTTAAGGGGGAATCACTTCGAGAGAGCATCAAGCGACATGAGCACTTTCTTGCTATGCAACTTGGCCTGAAGCCTGGACAAAAGGTTTTAGATGTTGGATGTGGAATTGGGGGACCACTAAGAGAAATTTCTCGTTTCAGCTTGACATCAATTACAGGGTTGAACAACAATGAGTACCAAATAACTAGAGGAAAGGAACTCAATCGCATATCCGGTGTGGACAAGACTTGCAACTTTGTGAAGGCTGACTTTATGAAAATGCCATTCCCGGACAATACTTTTGATGCAGTATATGCAATTGAAGCTACTTGTCATGCACCAGATGCGTATGGATGCTATAAGGAGATTTACAGAGTGCTGAAACCTGGTCAATTTTTTGCTGCATATGAATGGTGCATGACTAGTTCCTTTGATCCTAGTAACCAAGAGCATCAAAAAATAAAGGCAGAAATCGAGCTTGGCGATGGTCTCCCTGACATCAGGTTGACCACAAAGTGCCTTGAAGCTCTGAAGCAAGCAGGTTTTGAGGTCATATGGGACAAAGATTTGACTGAGGACTCCCCTCTTCCTTGGTATTTGCCTTTGGATACAAGTCACTTCTCGCTGAGTAGTTTCCGTCTAACAGCCGTTGGTCGACTATTCACAAGAAACATGGTCAAGGCTCTTGAGTATGTAGGACTGGCACCCAAGGGAAGTGTCAGGGTTCAAGACTTTCTAGAAAAGGCTGCAGAGGGACTAGTTGAAGGTGGAAAGAAGGAGATCTTCACACCAATGTATTTCTTTTTGGCAAGGAAGCCTGATTCAGACCACTAA 1038 0.4374 MSKAGAIDLALGVGGKIEKAEVLSAVEKYEKYHVCYGGEEDERKSNYTDMVNKYYDLVTSFYEFGWGESFHFAPRFKGESLRESIKRHEHFLAMQLGLKPGQKVLDVGCGIGGPLREISRFSLTSITGLNNNEYQITRGKELNRISGVDKTCNFVKADFMKMPFPDNTFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQFFAAYEWCMTSSFDPSNQEHQKIKAEIELGDGLPDIRLTTKCLEALKQAGFEVIWDKDLTEDSPLPWYLPLDTSHFSLSSFRLTAVGRLFTRNMVKALEYVGLAPKGSVRVQDFLEKAAEGLVEGGKKEIFTPMYFFLARKPDSDH 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02488 345 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 45 342 IPR029063 -
Accr1g02488 345 CDD AdoMet_MTases 103 207 - -
Accr1g02488 345 Gene3D Vaccinia Virus protein VP39 26 279 IPR029063 -
Accr1g02488 345 Pfam Methyltransferase domain 105 201 IPR013216 GO:0008168
Accr1g02488 345 PANTHER ZGC:194242 1 341 - -
Accr1g02488 345 FunFam Methyltransferase 25 276 - -
Accr1g02488 345 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 54 341 IPR030384 GO:0008168
Accr1g02488 345 Pfam Sterol methyltransferase C-terminal 278 341 IPR013705 GO:0006694|GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02488 Accr-Chr1 60720162 60724980 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02488 96 260 Acyl Lipid Metabolism Gene Families AT1G73600 32.727 4.68e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02488 K00559 - gmx:100796978 648.662