Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02453 ATGGCGTGCATAAAAGGGGTGAATCGATCGGCGTCTGTGGCTCTGGCGCCGGACGCGCCTTACATGGCGGCCGGAACCATGGCTGGGGCGGTTGACCTGTCATTCAGCTCCTCTGCCAATCTCGAAATATTTAAGCTTGATTTCCAGTCGGACGATCAGGAATTGCCGTTGGTCGCTGAAGTTCCCAGCTCCGAGCGGTTCAATCGTCTAACTTGGGGGAAGAACAGTTCTGCGTCTGAAGATTTCGGTCTCGGACTTATTGCTGGTGGACTGGTTGATGGGAACATTGACATCTGGAATCCGCTTACGCTGATCCGTTCAGAAGCCAAAGAAAATGCTTCTGTTGGACACCTTGTATGGCATAAAGGACCTGTTCGGGGTCTTGAATTTAATTCTATTGCACCAAATCTTCTTGCATCTGGGGCTGATGATGGTGAACTTTGCATATGGGATTTGGTCAATCCCTTGGAGCCCCATCATTTTCCGACACTGAAGGGTAGTGGATCTGCAAGCCAGGGGGAGGTTTCATTCTTATCATGGAATAGTAAGGTCCAACACATTTTAGCATCAACATCCTATAATGGAACCACTGTGGTCTGGGATCTAAAGAAGCAAAAGCCAGTGATAAGCTTTTCAGATTCAGTTAGAAGACGGTGCTCAGTTTTACAGTGGAATCCTGATGTTGCCACACAACTTGTTGTTGCATCAGATGAAGATGGTTCTCCTACTTTGAAGCTTTGGGATATGAGGAACATAATGACACCAGTAAAGGAGTTTGTGGGACATACTAGAGGTGTAATTGCAATGTCATGGTGTCCCTTTTATAGCACTTACTTGCTTACCTGTGGCAAAGACAGTCGCACTATATGCTGGGACACAATTTCTGGAGAGATTGTCTGCGAACTGCCAGCTGGGACCAACTGGAATTTTGATGTTCATTGGTATCCTAAGATACCTGGAGTGATATCAGCATCTTCATTTGATGGAAAAATTGGCATCTACAATATAGAGGGTTGCAGTAGGTATGGTGTTGGGGAAAATGATTTTGGCGCAGTACCCCTGAGGGCTCCAAAATGGTATAAACGTCCCGTTGGAGTCTCATTTGGATTTGGGGGCAAGCTTGTGTCATTTCATTCCAAGTCATCTGCTGCAGGTGCACCAGCTGGGGCTTCTGAGGTATTCGTGCACAACTTGACTGCTGAAGACAATCTTGTGAATAGGTCATCTGAATTTGAAGCTGCAATACAAAATGGGGAAAGAACTTTGTTAAGGGCTTTATGTGATAAAAAATATCAGGAATCAGGATCTGAGGAGGATAGAGAAACCTGGGGCTTCTTAAAGGTTATGTTTGAAGATGATGGGACTGCACGAACAAAACTACTCACACACCTTGGTTTCAGTGTACCTAGTGAAGGAAAAGAAGACACAGTTGCAGATGGTATCGCCCAAGAAGTAAATGGTCTTGGACTTGAGGACACGTCTGTTGATAAAGTAGGCCTTGAGGCAACCGATGAACCCACTGTTTTCCCTTCTGACAATGGGGAAGATTTCTTTAACAATCTTCCCAGCCCCAAAACTGATACACCTGTATCCACTTCTCGAGGCCACTTTGTTGTGGAAGATGCCAATGGTTCAGAGAAAATCCAAGAAGAGTTGGAAATGGAAGAGAGTGCTGACACTTCATTTGATGACGGTGTTCAACGTGCTCTAGTTCTTGGAGACTACAAGGGGGCAACTGCGCAATGCATATCTGCAAATAAGTGGGCTGATGCTTTAGTTATTGCTCATGTTGGAAGTGCATCCTTGTGGGAAAGTACACGGGATCAATACCTTAAGCTTAGCCGATCCCCATACTTAAAGATTGTATCAGCAATGGTGAGCAATGACCTCTTGAGCCTCGTGAACTCTAGGCCTCTGAAGTTTTGGAAGGAAACTCTTGCTCTTCTTTGCAGTTTTGCTCAGAGAGATGAGTGGACAATGCTTTGTGACACACTTGCTTCAAAACTCATGGTGGCTGGCAATACATTAGCTGCAACACTTTGTTTTATATGTGCTGGAAATATTGATAAAACAGTTGAAATTTGGTCAAGGAGACTGCAGAGTGAGCACAAAGGAAAATCTTCTGTTCAGCTTCTACAGGAGTTGATGGAAAAGACTATTGTTCTTGCTTTAGCAACTGGGCAAAAGAGGCTTAGTGCATCTCTATGCAAGCTTGTTGAGAAATATGCTGAAATTTTAGCAAGTCAAGGGCTGTTTACTACTGCAATGGAGTATCTGAAACTTTTAGGATCTGACGAGCTTCCTACTGAACTTGTGATCTTAAAGGACAGAATTTCTCTTTATACAGAATCTGAGCTAGACTTAAAGACTACAGCCTTTGACAATTCTCAATCACAGAGCAGATCTTTTTACGGTGCTGATAATTCTGCATATGGTGGAAATTATCAGGAGTCAGCATCCATGCAAGTGCAGCAAGGTGTTCCTGGAACTGCATATAATGAAAACTATCAACAACATTATGATTCTTCATATGGAAGAGGGTATGCAGTTCCCGCTCCATATCAGCAACCTCAACAACCTAATGTACCTGCTCCATATCAGCAACCACAACAGCCTAATTTATTTGTTCCATCACAACCCCTTCAGGTTCCTCAGCCAAACTTCTCTCCTGCTGCTGTCACACAGCCTCCTTTGAGATCTTTTGATCCTCATACTCCTCCGACACTAAAAAATGCAGCGCAATATCAGCAGCCCACTCTGGGTTCTCAGTTGTATTCTACACCTAGCAATCCACCTTACCAGCCTACAAGCCCTGTTCATGGCCAGAAATTACCGCATGTTGCGGCACCAACCCCTAATCCAATGGGATTCATGCCAGTTCCCAATTCTGGTGTTGTCCAAAGACCCGTTATGGGATCAATGCAGCCTATCAGGAATCCTCAACCAGCATCTGTACAACCAACTACACCACCAGCAGTTCCACCCCCTACAGTGCAGACAGCAAATACTTCAAATGTTCCTGTGCACCAGAAGCCTATTGTCACCACATTGACGAGGCTTTTTAATGAGACTTCAGAAGCACTGGGAGGTTCACGTGCAAATCCAGCTAAGAAGCGGGAGATAGAAGACAACTCCAAGAAACTTGGTGGGTTGTTTGCCAAATTGAACGGCGGGGACATCTCTAAGAATGCTTCTGATAAGCTGCTTCAGCTCTGTCAGGCATTAGACAATGGTGATTTTGGCACTGCCTTGCAAATTCAGGTGCTTCTTACTACCACAGAGTGGGATGAATGCCAATCCTGGTTAGGCTCACTCAAGCGAATGATCAAAACAAGGCAGAGTGTGAGAGTAAGTTAA 3357 0.448 MACIKGVNRSASVALAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSDDQELPLVAEVPSSERFNRLTWGKNSSASEDFGLGLIAGGLVDGNIDIWNPLTLIRSEAKENASVGHLVWHKGPVRGLEFNSIAPNLLASGADDGELCIWDLVNPLEPHHFPTLKGSGSASQGEVSFLSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFSDSVRRRCSVLQWNPDVATQLVVASDEDGSPTLKLWDMRNIMTPVKEFVGHTRGVIAMSWCPFYSTYLLTCGKDSRTICWDTISGEIVCELPAGTNWNFDVHWYPKIPGVISASSFDGKIGIYNIEGCSRYGVGENDFGAVPLRAPKWYKRPVGVSFGFGGKLVSFHSKSSAAGAPAGASEVFVHNLTAEDNLVNRSSEFEAAIQNGERTLLRALCDKKYQESGSEEDRETWGFLKVMFEDDGTARTKLLTHLGFSVPSEGKEDTVADGIAQEVNGLGLEDTSVDKVGLEATDEPTVFPSDNGEDFFNNLPSPKTDTPVSTSRGHFVVEDANGSEKIQEELEMEESADTSFDDGVQRALVLGDYKGATAQCISANKWADALVIAHVGSASLWESTRDQYLKLSRSPYLKIVSAMVSNDLLSLVNSRPLKFWKETLALLCSFAQRDEWTMLCDTLASKLMVAGNTLAATLCFICAGNIDKTVEIWSRRLQSEHKGKSSVQLLQELMEKTIVLALATGQKRLSASLCKLVEKYAEILASQGLFTTAMEYLKLLGSDELPTELVILKDRISLYTESELDLKTTAFDNSQSQSRSFYGADNSAYGGNYQESASMQVQQGVPGTAYNENYQQHYDSSYGRGYAVPAPYQQPQQPNVPAPYQQPQQPNLFVPSQPLQVPQPNFSPAAVTQPPLRSFDPHTPPTLKNAAQYQQPTLGSQLYSTPSNPPYQPTSPVHGQKLPHVAAPTPNPMGFMPVPNSGVVQRPVMGSMQPIRNPQPASVQPTTPPAVPPPTVQTANTSNVPVHQKPIVTTLTRLFNETSEALGGSRANPAKKREIEDNSKKLGGLFAKLNGGDISKNASDKLLQLCQALDNGDFGTALQIQVLLTTTEWDECQSWLGSLKRMIKTRQSVRVS 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02453 1118 MobiDBLite consensus disorder prediction 979 1003 - -
Accr1g02453 1118 Gene3D - 353 781 - -
Accr1g02453 1118 FunFam Protein transport protein SEC31 homolog B 1002 1116 - -
Accr1g02453 1118 Gene3D - 1 337 IPR015943 GO:0005515
Accr1g02453 1118 ProSiteProfiles Trp-Asp (WD) repeats profile. 118 152 IPR001680 GO:0005515
Accr1g02453 1118 FunFam Protein transport protein SEC31 homolog B 1 337 - -
Accr1g02453 1118 ProSiteProfiles Trp-Asp (WD) repeats profile. 259 301 IPR001680 GO:0005515
Accr1g02453 1118 Gene3D Functional domain of the splicing factor Prp18 1002 1117 - -
Accr1g02453 1118 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 118 152 - -
Accr1g02453 1118 FunFam Protein transport protein SEC31 homolog B 353 782 - -
Accr1g02453 1118 ProSitePatterns Trp-Asp (WD) repeats signature. 138 152 IPR019775 -
Accr1g02453 1118 SMART WD40_4 204 248 IPR001680 GO:0005515
Accr1g02453 1118 SMART WD40_4 252 292 IPR001680 GO:0005515
Accr1g02453 1118 SMART WD40_4 295 335 IPR001680 GO:0005515
Accr1g02453 1118 SMART WD40_4 161 201 IPR001680 GO:0005515
Accr1g02453 1118 SMART WD40_4 111 151 IPR001680 GO:0005515
Accr1g02453 1118 MobiDBLite consensus disorder prediction 983 997 - -
Accr1g02453 1118 PANTHER SEC31-RELATED PROTEIN 3 1113 IPR040251 GO:0006888
Accr1g02453 1118 MobiDBLite consensus disorder prediction 842 872 - -
Accr1g02453 1118 SUPERFAMILY WD40 repeat-like 12 337 IPR036322 GO:0005515
Accr1g02453 1118 Pfam Sec23-binding domain of Sec16 566 761 IPR024298 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02453 K14005 - gmx:100788642 1774.21