Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02109 ATGTCTATCGTTGCTCCTTCAAACACTGAAATTAAAGCCACATCCAAGTTGGGTCGACAATATGCGGATTATCAACCTTCTCTTTGGAATGATTATTTCCTCAAATATGCTTCTGACTCTTTGGAAGTTGATGATGAAATGAAGAAAACTATCGAAACCTTGAAAGAAGAAGTGAGGAAGATACTTGTCTCTATGAAGGAGCCCATAAAGAAAGCTGAAGTGATTGAGTCAATTCAATGTTTAGGTTTATCATATCATTTTGAACCTGAGATTGATGAAATGTTGAAGCAGATTCACAATGGTTACGTTGAAAATAACAAAATATCTCATATTGAAGATCTCCATTCTCTAGCTTTACTCTTCAAGTTATTGAGGCAGCATGGATATCGTGTTCCACCAGATGTGTTCAACAAGTTCAAGGATGAGAAAGGAAACTTCAGAGAAACACTCACTTCAGATGTTGAAGGAATGATAACTCTGTATGAAGCTTGTTATATGAGTATTCATGGAGAAGACATTTTAGACCAAGCACTCACTTTCACCACCAATCATCTCCGATCCATCACCATTCATGAATCAAGCTCTTTTGTTGCAGCAAAACTAAACAATGTGTTAAAGCAGTGTACATATAGGGGAACACCTAGACTAGAGGCACGAAAGTACTTATCAATCTACCACCTTCATCCTTCTTGTAATGAAGTTCTTTTGACCTTAGCAAAATTAGACTTCAACGCACTCCAAAAGCTGCACCAGAAAGAAATTGGCAACCTTTGCAAATGGTGGAACAGTTTGGATGTGCCAAGGAACCTACCTTATACAAGAAACAGGCTTGTGGAAAGTTACTTCTGGAGTCTTGCGGCTTGTTCTGAGCCTCAATACTCCAAAGGCAGAAGCATTACGACCAAAGCAATTTGCTTGATTACTATGATCGATGATACATTCGATATTTATGGAACCATTAACGAACTAGAACTCTTCACTTCGGCGATTGAGAGGTGGGATATTAGTTGCATGGATGACCTGCCAGGATATATGAAGCTAATTTATAAAGAAATATGGAATATGTTTGGAGAAATAGATGATGAGGTCAAGGGGCAAGAAGGAAGATCGTCCTACAATGTTGACTATCTCATAAAAGACTTTAAAAGCATAGTGGAAGCCTTCATGGCAGAAGCGAGATGGTTAGATAGAAACAAGATACCAACAGTAGAGGAGTACCTAAACGTATCGACAGTAACTATTTGTACTGCATTAATGTCCATGTCACATTTCATTTGTATGGGAGACATTTTCGTAACTGAGGATATCTTCAAATGGGCTCGATCCCAACCTAAAATTATCCAAGCTACTAATGTTATTGGACGGCTCATGAATGACATCGTCTCAAGAGAGTTTGAGCAAAAAAAAGAGCACGTTGCCTCGAGTGTGGAATGTTGTATGAAGGAGCAAGGAGTGACAAGGCTTGAAGCAGTAGATGAATTGAGAAAGATGATTAAGAGTGCATGGAAGGATATCAATGAGGAATGTCTTAAGCCAACTCGAGTACCTATACCCTTTCTGAAGATAGTTCTGAATTTTGCTCGCTCCTTCAATGTGATCTACAGGGATGCTGATACTTACACTCATTCTGAAGGAACCATGAAGGAGTTCATATCACAATTGTTTGTGGATCCTATATCGATATGA 1686 0.3867 MSIVAPSNTEIKATSKLGRQYADYQPSLWNDYFLKYASDSLEVDDEMKKTIETLKEEVRKILVSMKEPIKKAEVIESIQCLGLSYHFEPEIDEMLKQIHNGYVENNKISHIEDLHSLALLFKLLRQHGYRVPPDVFNKFKDEKGNFRETLTSDVEGMITLYEACYMSIHGEDILDQALTFTTNHLRSITIHESSSFVAAKLNNVLKQCTYRGTPRLEARKYLSIYHLHPSCNEVLLTLAKLDFNALQKLHQKEIGNLCKWWNSLDVPRNLPYTRNRLVESYFWSLAACSEPQYSKGRSITTKAICLITMIDDTFDIYGTINELELFTSAIERWDISCMDDLPGYMKLIYKEIWNMFGEIDDEVKGQEGRSSYNVDYLIKDFKSIVEAFMAEARWLDRNKIPTVEEYLNVSTVTICTALMSMSHFICMGDIFVTEDIFKWARSQPKIIQATNVIGRLMNDIVSREFEQKKEHVASSVECCMKEQGVTRLEAVDELRKMIKSAWKDINEECLKPTRVPIPFLKIVLNFARSFNVIYRDADTYTHSEGTMKEFISQLFVDPISI 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02109 561 FunFam Isoprene synthase, chloroplastic 197 549 - -
Accr1g02109 561 SFLD Terpene Cyclase Like 1 C Terminal Domain 232 560 IPR034741 -
Accr1g02109 561 Gene3D Farnesyl Diphosphate Synthase 26 549 IPR008949 -
Accr1g02109 561 Gene3D - 66 231 IPR036965 GO:0010333|GO:0016829
Accr1g02109 561 FunFam Isoprene synthase, chloroplastic 66 231 - -
Accr1g02109 561 CDD Terpene_cyclase_plant_C1 19 558 IPR044814 GO:0010333|GO:0016102
Accr1g02109 561 SUPERFAMILY Terpenoid synthases 232 559 IPR008949 -
Accr1g02109 561 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 25 228 IPR008930 -
Accr1g02109 561 Pfam Terpene synthase family, metal binding domain 236 504 IPR005630 GO:0000287|GO:0010333|GO:0016829
Accr1g02109 561 PANTHER OS04G0344100 PROTEIN-RELATED 19 550 - -
Accr1g02109 561 Pfam Terpene synthase, N-terminal domain 29 192 IPR001906 GO:0010333|GO:0016829
Accr1g02109 561 SFLD Isoprenoid Synthase Type I 232 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02109 Accr-Chr1 54912094 54915794 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02109 K15803 - pcin:129314992 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g02109 1 54912094 54915794 Accr1g02109 1 54912094 54915794 ECH