Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01860 ATGGCGATTCCTAGAAATCGCCTACTTTTAACTGCACTCCTTTCCATTCTCGTTTCGTTCGCCCTTGCTCACGGTCAAGATCAGCAGAAGAAGGAAGTCACTTATGACGGAAAGTCTCTGATCATCAATGGAAGACACGAGCTTCTTTTCTCTGGTTCTGTCCATTACACTCGAAGTCCTCCCGAGATGTGGCCAGACATTCTCGACAAGGCAAGACACGGAGGTTTGAACGTGATTCAGACTTACGTGTTTTGGAACGTTCATGAGCCAGAGCAAGGCAAGTGGAACTTTGAAGGAAACTATGATTTGGTGAAGTTTCTTAAGCTTGTTCAGCAAGAAGGAATGTATGCAACTCTTAGGCTTGGACCCTTCATCCAGGCAGAATGGAATCATGGAGGACTTCCGTATTGGCTAAGAGAGGTACCGGACATCATATTCCGCACTGACAATGAACCCTTCAAGTTCCACATGGAAAGATACGTGTCAACGGTGATAGATAAAATGAAGGCCGAGAAGATGTTTTTCTCCCAAGGAGGTCCTATCATCTTGGCACAGATTGAAAACGAGTACAATCATGTCCAAGCAACTTATGAAGCCCAGGGAGCCAGTTATATTCAGTGGGCTGCAAATCTGGCTGTGTCAAAGAATGTCGGAGTTCCATGGATCATGTGTAAGCAAACCGACGCTCCTGATCCGGTGATCAATGCGTGCAACGGAAGGCAATGTGGGGATACTTTTTCTGGCCCCAACAAACCATACAAGCCTTCCATATGGACCGAAAACTGGACTGCCCAATACAGAGTTTTCGGAGACCCACCATCCCAGAGAAGTGCAGAAGATCTTGCCTTTTCAGTTGCTCGCTTTTTCTCTAAGAACGGATCATTGGTCAATTACTACATGTACCATGGGGGAACAAACTTTGGTAGAACCAGCTCTGCTTTCACTGCAACCCGTTATTACGATGAAGCTCCTCTTGATGAATACGGTCTGCAAAAAGAACCAAAGTGGGGTCACCTCAGGGACCTTCACAGGGCTCTGAACCTTTGCAAGAAGGCTCTGCTCGGGGGAACACCTAGTGTCACCAAGCTGAGCGAAAAAATTGAAACCAGGGTCTTTGAGAAGCCAGAAAGTGGTATATGTGCTGCTTTCTTAGCTAACAACCACACACAGAAAGGAGCAACCGTAAACTTCAGAGGGCAGAGTCATTTTTTGCCGCCACACTCCATCAGCATCCTCCCTGATTGCAAGACTGTGGTCTATAACACTCAGATGGTCGCCTCGCAACATAATTCAAGGAACTTCAAGAGATCACAGATTGCAAACAGCAATAAGTGGGAGGTATTTACAGAAGCCATTCCAACTACCCAGGACGTGCCAGTCAATCAGGATTTTCCGCAAGAACTTTACGGTTTACTTAAGGACACCACCGACTATGCATGGTACACCACCAGCATTGTGTTGAGCCCAGAAGACATGCCAAGGAAGAAAGGAGTATCCCCTGTTCTCCGTATCATTAGTCTTGGCCATTCATTGGTTGCATTTGTAAATGGCGAATACCTTGGAACCGCTCATGGAAGTCATGACGAAAAATCTTTCGTATTCGAGCAAAGTGCAAACTTAAAAGTTGGGGTCAACCACATATCTATCTTGGCTAGTACTGTTGGACTCCCAGACAGTGGTGCATACATGGAGCACAGGTATGCTGGACCCAAGTCTATAAACATCCTTGGTCTGAACTCAGGAACCATTGATCTGACTAACAACGGATGGGGCCATCAGGTTGGTCTCAAAAGTGAGAAACTTGGCCTCTTCACCGAGGACGGATCAGAAAAGGTACAATGGAAACCAATCAATGGACGTCAACCAGCTCTCTCTTGGTACAAGAGACGTTTTGATGCCCCAGAAGGAAAAGATCCTGTAGCCATTCGAATGAATGGCATGGGAAAGGGCATGGTTTGGATAAACGGTAACAACATTGGCCGTTATTGGATAAGCTACCTCTCTCCTCTAGGACAGCCTAGTCAGTCAGAGTACCACATCCCAATAGCTTGGTTGAAAGACAAAGACAATTTGGTGGTCGTATTGGAGGAGGCGCCTGCAACACCAGAAGAGATCGAGGTGCTAACTGTGAACAGAGACACAATCTGCAGTTACATCACAGATTATCACCCTCCCAGTGTCAAATCCTGGGGGAGCAAGAGCAAAAAGTTCCAATCTATAGTGGAGAAGGCGATCCCAGGAGCTTCACTGAAATGTCCGAATCAGAAGAGGATTGTGAATGTAGATTTCGTGAGCTTCGGAAACCCCAAGGGTTTCTGCGGTGGCTTCACTATGGGGAATTGCAGTGTTACAGCAACGAAGCAGATTGTGGAGCAGCAATGCCTGGGAAAAATGAGCTGTTCCATTCCAATGGATCCCAAGGTTTTATTGAAGAATGGCGATGTTTGCCCTAATATAAGGAAGACTCTTGCGATCCAAGTGACGTGTTCCTCTTAA 2496 0.4643 MAIPRNRLLLTALLSILVSFALAHGQDQQKKEVTYDGKSLIINGRHELLFSGSVHYTRSPPEMWPDILDKARHGGLNVIQTYVFWNVHEPEQGKWNFEGNYDLVKFLKLVQQEGMYATLRLGPFIQAEWNHGGLPYWLREVPDIIFRTDNEPFKFHMERYVSTVIDKMKAEKMFFSQGGPIILAQIENEYNHVQATYEAQGASYIQWAANLAVSKNVGVPWIMCKQTDAPDPVINACNGRQCGDTFSGPNKPYKPSIWTENWTAQYRVFGDPPSQRSAEDLAFSVARFFSKNGSLVNYYMYHGGTNFGRTSSAFTATRYYDEAPLDEYGLQKEPKWGHLRDLHRALNLCKKALLGGTPSVTKLSEKIETRVFEKPESGICAAFLANNHTQKGATVNFRGQSHFLPPHSISILPDCKTVVYNTQMVASQHNSRNFKRSQIANSNKWEVFTEAIPTTQDVPVNQDFPQELYGLLKDTTDYAWYTTSIVLSPEDMPRKKGVSPVLRIISLGHSLVAFVNGEYLGTAHGSHDEKSFVFEQSANLKVGVNHISILASTVGLPDSGAYMEHRYAGPKSINILGLNSGTIDLTNNGWGHQVGLKSEKLGLFTEDGSEKVQWKPINGRQPALSWYKRRFDAPEGKDPVAIRMNGMGKGMVWINGNNIGRYWISYLSPLGQPSQSEYHIPIAWLKDKDNLVVVLEEAPATPEEIEVLTVNRDTICSYITDYHPPSVKSWGSKSKKFQSIVEKAIPGASLKCPNQKRIVNVDFVSFGNPKGFCGGFTMGNCSVTATKQIVEQQCLGKMSCSIPMDPKVLLKNGDVCPNIRKTLAIQVTCSS 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01860 831 SUPERFAMILY Galactose-binding domain-like 409 570 IPR008979 -
Accr1g01860 831 SUPERFAMILY (Trans)glycosidases 31 349 IPR017853 -
Accr1g01860 831 PRINTS Glycosyl hydrolase family 35 signature 64 82 IPR001944 GO:0004553|GO:0005975
Accr1g01860 831 PRINTS Glycosyl hydrolase family 35 signature 176 191 IPR001944 GO:0004553|GO:0005975
Accr1g01860 831 PRINTS Glycosyl hydrolase family 35 signature 294 309 IPR001944 GO:0004553|GO:0005975
Accr1g01860 831 PRINTS Glycosyl hydrolase family 35 signature 257 272 IPR001944 GO:0004553|GO:0005975
Accr1g01860 831 PRINTS Glycosyl hydrolase family 35 signature 622 636 IPR001944 GO:0004553|GO:0005975
Accr1g01860 831 PRINTS Glycosyl hydrolase family 35 signature 313 329 IPR001944 GO:0004553|GO:0005975
Accr1g01860 831 PRINTS Glycosyl hydrolase family 35 signature 119 138 IPR001944 GO:0004553|GO:0005975
Accr1g01860 831 PRINTS Glycosyl hydrolase family 35 signature 43 60 IPR001944 GO:0004553|GO:0005975
Accr1g01860 831 PRINTS Glycosyl hydrolase family 35 signature 649 665 IPR001944 GO:0004553|GO:0005975
Accr1g01860 831 FunFam Beta-galactosidase 29 349 - -
Accr1g01860 831 ProSiteProfiles SUEL-type lectin domain profile. 746 830 IPR000922 GO:0030246
Accr1g01860 831 PANTHER BETA-GALACTOSIDASE RELATED 20 768 IPR001944 GO:0004553|GO:0005975
Accr1g01860 831 Pfam Galactose binding lectin domain 750 829 IPR000922 GO:0030246
Accr1g01860 831 Gene3D - 592 719 - -
Accr1g01860 831 Pfam Beta-sandwich domain in beta galactosidase 353 425 IPR041392 -
Accr1g01860 831 Gene3D - 427 569 - -
Accr1g01860 831 Gene3D Glycosidases 29 349 - -
Accr1g01860 831 Gene3D - 739 831 IPR043159 -
Accr1g01860 831 Pfam Glycosyl hydrolases family 35 39 345 IPR031330 -
Accr1g01860 831 CDD Gal_Rha_Lectin_BGal 748 829 - -
Accr1g01860 831 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 178 190 IPR019801 GO:0004553|GO:0005975
Accr1g01860 831 FunFam Beta-galactosidase 299 427 - -
Accr1g01860 831 FunFam Beta-galactosidase 592 716 - -
Accr1g01860 831 SUPERFAMILY Galactose-binding domain-like 588 735 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01860 Accr-Chr1 49078506 49083483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01860 32 829 Glycoside Hydrolase AT2G16730 60.349 0.0 1059
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01860 - - gmx:102663614 1246.49