Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01851 ATGGGACGCTGCCTTCTTTGCTTCCTCCTTATTCTCATCTTTCTTGCATTTCCTTTCCTATCGGAGGTGCATTCGGCATCTTTCAAGATTGTGAATAAGTGTCGCCACACGATTTGGCCGGGTTTGCTCTCTGGCGCCACTTCTCCACAGCTTTCCACTACTGGATTCGCTCTTCAAAGTGGCAAGTCCAACACTATAACGGTCCCGAAATCTTGGTCGGGTCGGATATGGGCTCGAACTCTTTGTGGTCAAGATTCTGACGGAAAGTTCTCCTGCCTCACTGCAGACTGCGGCTCCGGTCAAGTACAGTGTGCCGGTGGAGCTAAGCCACCCGCCACGTTGGCTGAGTTCACTCTCAACGGCGCCGACGGGTTAGATTTCTACGACGTGAGCTTGGTCGATGGGTACAACCTGCCGATGTTGATCGTTGCAAAAGGAGGAAAACGGGGTGGATGTAGCGCCACCGGATGTTTGGTCGACCTGAACGGAGCATGTCCGGCTGATCTAAGGGTGGCGCGTGGGAACGGGACCGGTACTGGTGGTGATAGCATGGCTTGCAGGAGCGCGTGTGAGGCCTTTGGTGATCCGCAGTATTGTTGCAGTGAGGCGTACGCCACGCCTGACACGTGTCATCCATCAGTTTATTCGCAATTCTTCAAGCACGCTTGCCCCCGCGCGTATAGTTACGCTTATGATGACAAGACAAGCACATACACCTGTGCTTCGGCTGACTACTTGATCATATTCTGCCCCTTGCCCTACACCAGCCAGAAGTTGCTGGGAGCACGAAAAGATGGGGCACCACTTCCCCTTGTAAACAAAACCATGATGTACTTGAAGCATTCAGGAGTTTCTTCATCAACAGGTCTGAATCAAATGCAGATTATGGCGTACATTGCCTCTCTTGCAGCAGCATCTTTCCTGTTTTGCTCTCTTTTTCACCCGTTATGA 951 0.5195 MGRCLLCFLLILIFLAFPFLSEVHSASFKIVNKCRHTIWPGLLSGATSPQLSTTGFALQSGKSNTITVPKSWSGRIWARTLCGQDSDGKFSCLTADCGSGQVQCAGGAKPPATLAEFTLNGADGLDFYDVSLVDGYNLPMLIVAKGGKRGGCSATGCLVDLNGACPADLRVARGNGTGTGGDSMACRSACEAFGDPQYCCSEAYATPDTCHPSVYSQFFKHACPRAYSYAYDDKTSTYTCASADYLIIFCPLPYTSQKLLGARKDGAPLPLVNKTMMYLKHSGVSSSTGLNQMQIMAYIASLAAASFLFCSLFHPL 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01851 316 ProSitePatterns Thaumatin family signature. 88 104 IPR017949 -
Accr1g01851 316 FunFam THAUMATIN-LIKE PROTEIN 1 26 251 - -
Accr1g01851 316 Pfam Thaumatin family 32 251 IPR001938 -
Accr1g01851 316 CDD TLP-PA 27 250 - -
Accr1g01851 316 PRINTS Pathogenesis-related protein signature 241 250 IPR001938 -
Accr1g01851 316 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Accr1g01851 316 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Accr1g01851 316 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Accr1g01851 316 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Accr1g01851 316 PANTHER OS03G0233200 PROTEIN 12 251 IPR001938 -
Accr1g01851 316 Gene3D Thaumatin 26 251 IPR037176 -
Accr1g01851 316 SMART tha2 28 251 IPR001938 -
Accr1g01851 316 SUPERFAMILY Osmotin, thaumatin-like protein 27 251 IPR037176 -
Accr1g01851 316 ProSiteProfiles Thaumatin family profile. 25 251 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01851 Accr-Chr1 48907385 48910290 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01851 6 251 Receptor kinase-like Gene Family AT5G38280 48.996 2.02e-80 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01851 - - gmx:100802252 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g01851 1 48907385 48910290 Accr1g01851 1 48907385 48910290 ECH