Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01839 ATGGCGGATACTAAGTCTGTCGACGCTGCTCTCTGGTGGGATTCTTTCACTCTGCTACTTACTGAACTTGAGAACTCCTCTCTCGCCTCAGGCCTCCCTCAAAATTTGGTGAAAAAGTTGAAGGACAACCATCCCTGGCTAGTGGATGCAGTTTCGCGCTTCAAGCCACCAAATGAGAAATCAAAGGAAGCTCTGAATTCGAAGAAACTGCAAATTGGATCTCACCAACTAACTATACAAACACATTTGAAAGACAAAGCTTTGAAAATCAGCTCATACTTGCAACTAGATGAAGTTCAATCATACATTCTTGCCGAAAGGTCAATCAAACATAGCAATGTAGCAGTTGATTCCATGGCTCAAGAATTTCTTCACGTGATAGTAATTCAATATTATACGGAGAGACAGTACTTGCTGAAATGCATCAGGTGGATTCTCATGCAAGCTATATATATTGGACCAGGCTCTAAAGAACATGTTATTAGAGAGGAGGCAAAGAAGTTGTTTCATGATGGACTGGAAACCAAATTAATATCTTTGTTTCAGGATCTTCTGCTTTTTAGTTATCCAGAGCAAATGGATGTTGATCTTTTCACTCTGTGGGCTGAGGAGGCTCTAATTGAAGACAACTTAGTTCTGGACATTCTCTTCCTTGCGTATTATGACTCATTTTGTTCTTGTAGCGGTGAAAAGTGGAAGAAGTTATGTAATATTTACAAGGGAATCATTTCTGGTCACTATAACTTCAAAAAGCTTGCAATAACGTCAGAAGCCTGGCAACTGTCTTATCATGCCAAAGTTCAACTACTGCTTATCCTTATAGAAACTCTGGATTTGGAAAATCTTCTTCAGATGGTTCATGATGAAACACCTTACAGGAAAGGTGCAGCTAGTTTTTCATTGATAGACGTACAAGAGATGGATGCATTAGTTTCTACTTTCAATGCATTTGAAATGAAAGAAGCTGGCCCCTTAATTCTTGCATGGGCCGCATTTCTTTATCTGCTATTGACACTTCCAGGAAAAGATGAAAACAATGACCTAATGGAGATTGATCATGTTGGTTATGTTCGACAGGCATTTGAGGCTGCATCCTTTAGTTACTGTCTTGAAATTCTTGATTGTGACATACTGAGGGATTATGATGGTCCTGTTTCTGGATATCGCAGTGTTTTGAGAACACTATTATCTGCATTTATTGCATCTTATGAAGTCAACATTCAGGCAGAGGACAGCAACCCCATTTTGATTCTGGATATTCTTTGCAAGATTTACCGAGGAGAGGAATCACTTTGTATTCAGTTTTGGGACAAGGAAAGTTTTATTGATGGTCCAATTCGGTGTCTTCTTTACAACCTGGGGAGTGAGTTCCCTTTCCAGACAGTGGAACTTGTGCAACTCTTATCTTCCCTTTGTGAGGGAACTTGGCCCGCAGAATGCGTGTATAACTTCCTAGACAGGTCTGTTGGTGTATCATCCTTAATGGAGATTGGTAATGAGGCAGTAACAGACGTTTCTCATATAGTTGAGGCACAAAATCTAGTGCAAGTTCCTGGAATTGAAGGTTTTTTTATTCCTGCTGGAACTCGTGGACATGTCTTGAAAGTTATTGGAGGGAGTACTGCCCTTGTACGATGGGAGTATGCAACATCAGGAATGTTTCTCTTACTCCTACGTTTAGCTCAAGAGGTACATTTCAATGGCAAGGAGGAGGTTCTTTTGACTCTTGACCTGCTCAGTAGATTGGTTTCCTTTAACACTGCTGTCTGTTTTGAGTTGATGAGTCTCAGCTGCTCTGCACATTCTCATGCTGTCAGCTTGACAAACGAGCAGGAAAAGAATGTCTGGGTGATTGAGATCATTTGCAATCTTATCAAAAACCCATCTCTGAATTCCTATGGTGCTGCACTGATGTCGAAGGGCATCAAGATTTTGGGAAAGATGTTGATTTGTTCTCCTTCTAGTGTTGCGGCAATTGTGCTAAATGCAAATATATTTGACATGGCTTTGCAGACAACTGTTTTCAGTGGAGGAAATAATGCTTTGTCTAGTGGTTCATGGTTGCTTTCTGGCAAACTAGCTAAGATGCTTTTAATTGACTGTGAGCAGAACAGTAATGACTGCCCCTTGGCAATATCAGTTCTGGACTTTACCATACAGCTGTTAGAGGCTGGGGTGGAGAATGATTGTCTCCTTGCGTTGATTATTTTCTCTTTGCAGTATGTTCTGATCAATCATGAATCTTGGAAATACAAGATGAAGCATGTTCGATGGAAAGTGACATTGAAGGTGCTTGAATTGATGAAAAAATGCAACATATTGAAGACTTACCATGGAAAAATGGGTGAGATAATTCATGATGTGTTGTTCTCTGATTCATCCATTCATAAGACGCTGTTCCAAATGGCTTGTACTACAGCAAATGCCTTGGAGAAATTGCATGCAAGCCGCCTCTTTGATCCAATGGAGATTGAAGGGTTGCAATTGGCAATAAGTTCTGTATTAGATGTTCTTCTTATCATGCTGACCAAACTTTCTGAGGAGGCAGCATCCAGCTTTTCTGCTTTTCAACAAGCAGTGTTATCATGTACAACCAATTCTGTCCCTGTTGCTGCTGCTGTTATATCCTTGATTTCATACTTTCAAGATCCTGCCATCCAAATTGTTGCTGCTAGGTTTATTTCATTCTTATTTAAAATAGCAGAGTCCATTCAACCATTTTCGTATGGAACCACATCATTTGCCCCAGAATCTAATCAAGTCATGGATTTGAGACACTCTCTGAGCTACATATTGTCGGAGCAGTCAGCATCTAATGAAGATCTGTTTATTGCAACAGTTAATCTATTGACTTCTGCAGTGCATCACCAGCCTGCATTTCTTATTGCTATATTTACTCCAGAGGAGATGGACGATGGTCAGTTAATTGCTATTGGTGATGTGAAGTCCGAAGGTTCAAAGAAGTCAGGCCTGATGGATGCACTTATGGATTATATTGTAAGGGCAGATAATCTGATCAAGAGCCAACCTCACATACTGCTGGGTGTACTTAACTTCATGACTGCCTTGTGGCAAGGGGCTCCTCAGTACTTAAATATCCTGGAGTCTCTGAGAAGCTCTGAGAAGTTCTGGAAGTACTTGTCCAATGCAATCTTAAAAGTTGCTGGTAGCACAACTCCTCTACCTGTTAATCTGACTGAGAAGGATGCTCGAAATCTAGCAAATAGCTACCTTTGTCAATCTGCAATACTTGGTATCATGTCATATGAGCTTTTCTTGCAGAAAAAGTTGTTGCTTGCAGAATCACTTGTGAAGGATGCAGCTGGATCTCAGGGCAAGGAACAAGATGGTGCAAAAACTGAAAAATCTAAGGCACCTGCTTTTTCTGATGTTAAGGAAATTTGGTCTTCATGGTGTAAAGATTCTGTTTTGGAGAAACTAATGAAATCGTATACTTCTGGGTATAATGATGATATATATAATAGTGCAAAAGTTGCCATCAGTTTATTTTTTGTCCATGTGATGGAAAAATTAGTTGCTGGTGATTCTGGAAGTTTATCAGTGTCATTGCAGCAGAAGTTTCATACGATGTTAGCAAAGTTGAGCATACATCCTGCGTTTTCTGAATTACTCTACCAGTATTCACAACGTGGTTACAGTGAGGGGAAGAAATTAAAGAAGTTGATACTCAGTGATCTCTATTATCATTTGCAAGGAGAGCTAGAAGGCAGAAAAGTTGGTACAGGACCATTTAAAGAATTGTCTCAGTATTTGGTTGAATCAAATATTTTGGAAACCTATCAACACAATTTCAATGGTGACCTTTGTGCAACTACCAAGAATTTATACTTGTTTGACCTTGTACGCTTGCAAGCTGATATAGGATTAGATGTGTGGGATTGTTCCGAGTGGAAGGCATCTAAGGAGATTGCCGAAATCATGTTGCACTGGCTGCAGGAAGCAAACTCATTTATGTTGACTTCAAGTTCTAAGCTTTCCGCATTGAAAGCATTGATTTCTATCTTGACTGTCTACCATGATGATGCACCAGGGAGAAAATCTATGGGAGAGGAGATTCCAGATCAAATAATTTTCACGTGCATTGATAATATATGTCAATCTTTACACGCTACAATTGAAAAAGTAGCACCTGTTCTTGATGTGTCTGAAGATATACTCAATTTTCTTGCCTTCCAATCTGAACTGCTTCTCCAGTTGACTAGAACTGTCTGCAAAAGTCTCTCCTTTGATGTTTCCCTACTTGTTCTGAAATGTTCTGCGTCAGGTCTTAAACTGTTTAGTGAGCTTAAGCTGTTGTCTTCTAGGGCCAGTGTGATTATGAAGATATTACTCACATTGCTGCTTTTAGTATTAGATTCCAACTGCCTCAATTCTCATTTGGGTGGGACCATAGATGAGAAGTCTGGTGAGGGCTTTTCTAAAATTTCAAATGCAGTCCTTGGCCTACTTCCCATTCTTTGCAAATGTGTTACTGCTCCTGAACATTGTATGCTGTCTCTGTCAGTTACGGACCTGATATTAAGAAATTTCTTGATGCCTGAGACTTGGTTACCTGTCATACAGAATCATCTCCAGCTTCAACTTCTTATGCTAAAACTTCAAGATAAAACGTCGTCTTCCATTCCAATAATATTGAAGTTTCTTTTGACACTTTCACGTGTAAAAGGAGGTGCTGAGATGCTTTATGGTTCTGGTTTCTTGTCATCTCTGAGAGTATTGTTTGCTGAATGTGGTGAGGCGTTCTCAAGAATACATAGTGAAAATGTGGGTAGCTTACATGAAAAGTTTGAAATGCCTGGAGACATTTGGGGACTTGGATTAGCTGTGGTCACAGCTATGGTTCAATCCTTGGAAGACAGTTCTTCTTGCACGGCTATTGTGGACAATGTAATACCTTACTTTTTCCAGGAGAATGCTTATCTTATTTTTGGTTCTCTAAATGCTCCGGATCTCCCTTCAGATCATCGTGACAAGAAAAGACCTCGGCCACAGAGGTCATGGATGTCTCTGGCTAATCTGAAGGAGACAGAACATACGTTGATGCTCATGTGTGAACTAGCAAAACATTGGAATTCATGGACCAAGGCAATCGATGAAGCGGATAGACAGCTTAGAGAGAGATGCATCCATCTTTTAGCCTTTATTAGTAGGGGCACTCAACGCCTTGGTGATTTGTCAAACAGGAGTGCCTCACTTTTATGCCAACCTACTCTTAAGGAGGATTTTGACAGTTGCTTAAAACCTTCATATATCAACAGTAAACATGGATGGTTTGCCATTTCACCACATTGCTGCGTGTCAAAACTGAAGACGACTCTTGTCTCAACTGCTTTGACCACCCATGGTCAAGCAACTAAAAGTACAGATCTGTTTCCAAAAACATGCTTTTCTGACACTGTTGCTGTGCAAATATATAGAATTGCATGCCTTCTTTTAAAGTTTCTCAGTTTACAAGCTGAGGGTGCTGTTAAAAGGGCCGAGGAGGTTGGCTTTGTTGATCTTGCACATTTTCCCGAGCTTCCAATGCCAGAAATCTTGCATGGATTGCAGGATCAAGCCATTGCGATTGTTACAGAGTTATGTGAGGCCAACAAACCGAGGGTTTCTCCTCAAATTCAGAATCTTTGTTACTTATTGTTGCATATAATTGAAATGGCCTTGCAGTTGGAGCTTTGTGTTGTGCAGATCTGTGGCATAAGACCTGTATTAGGGCGTGTGGATGATTTTTCAAAGGAAATTAAAACTTTATTTGGTGCAATGGAGGAGCATGCGTTTCTAAAAGCTTCAAAGAAGTCCTTGAAACAAATGGTATCATTTGTCTATCCCAGAATGCTGCAATCGGAGGGTTTATGA 5874 0.4018 MADTKSVDAALWWDSFTLLLTELENSSLASGLPQNLVKKLKDNHPWLVDAVSRFKPPNEKSKEALNSKKLQIGSHQLTIQTHLKDKALKISSYLQLDEVQSYILAERSIKHSNVAVDSMAQEFLHVIVIQYYTERQYLLKCIRWILMQAIYIGPGSKEHVIREEAKKLFHDGLETKLISLFQDLLLFSYPEQMDVDLFTLWAEEALIEDNLVLDILFLAYYDSFCSCSGEKWKKLCNIYKGIISGHYNFKKLAITSEAWQLSYHAKVQLLLILIETLDLENLLQMVHDETPYRKGAASFSLIDVQEMDALVSTFNAFEMKEAGPLILAWAAFLYLLLTLPGKDENNDLMEIDHVGYVRQAFEAASFSYCLEILDCDILRDYDGPVSGYRSVLRTLLSAFIASYEVNIQAEDSNPILILDILCKIYRGEESLCIQFWDKESFIDGPIRCLLYNLGSEFPFQTVELVQLLSSLCEGTWPAECVYNFLDRSVGVSSLMEIGNEAVTDVSHIVEAQNLVQVPGIEGFFIPAGTRGHVLKVIGGSTALVRWEYATSGMFLLLLRLAQEVHFNGKEEVLLTLDLLSRLVSFNTAVCFELMSLSCSAHSHAVSLTNEQEKNVWVIEIICNLIKNPSLNSYGAALMSKGIKILGKMLICSPSSVAAIVLNANIFDMALQTTVFSGGNNALSSGSWLLSGKLAKMLLIDCEQNSNDCPLAISVLDFTIQLLEAGVENDCLLALIIFSLQYVLINHESWKYKMKHVRWKVTLKVLELMKKCNILKTYHGKMGEIIHDVLFSDSSIHKTLFQMACTTANALEKLHASRLFDPMEIEGLQLAISSVLDVLLIMLTKLSEEAASSFSAFQQAVLSCTTNSVPVAAAVISLISYFQDPAIQIVAARFISFLFKIAESIQPFSYGTTSFAPESNQVMDLRHSLSYILSEQSASNEDLFIATVNLLTSAVHHQPAFLIAIFTPEEMDDGQLIAIGDVKSEGSKKSGLMDALMDYIVRADNLIKSQPHILLGVLNFMTALWQGAPQYLNILESLRSSEKFWKYLSNAILKVAGSTTPLPVNLTEKDARNLANSYLCQSAILGIMSYELFLQKKLLLAESLVKDAAGSQGKEQDGAKTEKSKAPAFSDVKEIWSSWCKDSVLEKLMKSYTSGYNDDIYNSAKVAISLFFVHVMEKLVAGDSGSLSVSLQQKFHTMLAKLSIHPAFSELLYQYSQRGYSEGKKLKKLILSDLYYHLQGELEGRKVGTGPFKELSQYLVESNILETYQHNFNGDLCATTKNLYLFDLVRLQADIGLDVWDCSEWKASKEIAEIMLHWLQEANSFMLTSSSKLSALKALISILTVYHDDAPGRKSMGEEIPDQIIFTCIDNICQSLHATIEKVAPVLDVSEDILNFLAFQSELLLQLTRTVCKSLSFDVSLLVLKCSASGLKLFSELKLLSSRASVIMKILLTLLLLVLDSNCLNSHLGGTIDEKSGEGFSKISNAVLGLLPILCKCVTAPEHCMLSLSVTDLILRNFLMPETWLPVIQNHLQLQLLMLKLQDKTSSSIPIILKFLLTLSRVKGGAEMLYGSGFLSSLRVLFAECGEAFSRIHSENVGSLHEKFEMPGDIWGLGLAVVTAMVQSLEDSSSCTAIVDNVIPYFFQENAYLIFGSLNAPDLPSDHRDKKRPRPQRSWMSLANLKETEHTLMLMCELAKHWNSWTKAIDEADRQLRERCIHLLAFISRGTQRLGDLSNRSASLLCQPTLKEDFDSCLKPSYINSKHGWFAISPHCCVSKLKTTLVSTALTTHGQATKSTDLFPKTCFSDTVAVQIYRIACLLLKFLSLQAEGAVKRAEEVGFVDLAHFPELPMPEILHGLQDQAIAIVTELCEANKPRVSPQIQNLCYLLLHIIEMALQLELCVVQICGIRPVLGRVDDFSKEIKTLFGAMEEHAFLKASKKSLKQMVSFVYPRMLQSEGL 1957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01839 1957 PANTHER NUCLEOPORIN NUP188 HOMOLOG 10 1952 IPR044840 GO:0017056
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01839 Accr-Chr1 48767877 48791923 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01839 K14311 - gmx:100796560 2700.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g01839 1 48767877 48791923 Accr1g01839 1 48767877 48791923 ECH