Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01825 ATGGAAGTAAGCCTCACTTCCAATCACTATACTTTTAGTCTAACTTCACGTTCTCCTTCTGCCTTTTCTCTTTCGAGTCTCCGATCCATCCGTACGCAATTCCTCGGTTGTTCTCATAATCTCAGGCCTCCTGGATGTGTTCGCTCTAGAAATAATAAATGTAAGAAGTTGCGGCTTCTTCAGCTCCATTCTCCTCGTTTTATCTTCAAAGCCTCTTTGAGTTCTCACTCCGTCGTTGTCGTCATAACCTTAGTTACTTTATCTGCCGTTTCTCTGTTCTACTATAATTACATCAAGAGAAAGAAGAACTCCAAAGAGATACTGGGACACCCGAAATTTTCATTATCACAGCAAGGAGGTAACATTGGGAGCCAGGCCATCGAAAGTCAGATTCTTTGCTTTCCGCAATTTCAAGGGGAGAACTTGCTAAAGGAAATTGGAATATTGGAGGATAAATCTGATAGAGAAAACCATGATTTTGAGGGCAAAGAGACCCAACTAACATATTGCGCAGCTCCTATGGTGCAAGAAGAGGCTGTTGTGACTGAGAAATTAGAGTCACCTTCTGATGTTCTAACCTCTAGCGTTAACACTACATCATCTTCAAACACTTCCAAGGTTGTAGATGAATCTCATTTGTCTGCGGAATTCCAATCAGGTCCTTTTGAGCCTCTATCTTTTGCCGCAGAGATGACTGAATTACAAGTGGAAGAAACAAGAGATAAAGCTCGCTCTGATTCTGAGTTGCCTATAATCACAAATAAACATGAGCATACTGCTTCTCTTGATTCTTTAAACAATGAATTCACAATAGTGAAAGATCGTCCTAAAGAAAAAATTGAACTTGGTCACATTGATGTCCTAGCTGGTGAATCTGCGAGGCAAGAACTGTACATGTTTTATCAGGTCAACATGCCTTCAACAGGATCTATGTCACCACTGAATGGTTTAAAATCACCACCTTCTCATGCTTTTTTCATGAAGAAAAAAGAATTGAAATCCACAATGGCGAATAGTGCTTTAAAAGGACCAGAATCATTAAAAGAGGTTTCTCTAGAAATTTTAGAGAATGTTGAAGGAGTGGAACCAAGAGCCAGTTACAAAGAAGGCTATTCCCAGCAAAATGGAAGTCATTCATTGAGTAAGCGCAACAGATCTCAGAGCAACAGGGGAAAAACTGATCTGGACCAGAAAAGTAACGAACTTCTTCCCCAGAATTCTGACTCAATCTGGGAGCACGTTGATAAGGAAAATCATCATTCTCAACATCTTAGAACATATAATTCTTTGCTAAAAGATGGAAGGTTACATGAATGTGTTGAATTCCTTAAAGATATGGAAATGAAGGGAATTTTAGACATGACTAAGGTTTATCATGCAAAGTTTTTTAACATCTCCAAGAGACAAAAGGCTGTTAGAGAAGCTTTCGATTACATTAAGCTTATTCCAGATCCAAAATTGAGCACATTTAATATGCTCATGTCCGTGTGTTCTAGCTCTCACAATTCAGAAGGGGCTTTCGAAGTTCTGCAGCTTGTTCAGGGGGCTGGATTCAAACCTGATTGCAAACTTTATACCACTTTGATATCAACATGTGCCAAGAGTGGTAAAGTTGATCAGATGTTTGAGGTTTTTCACAATATGGTTAATTCTGGAATTGAACCTAACGTTCATACCTATGGGGCACTTATTGATGGTTGTGCTAGAGTTGGGCAAGTTGCTAAAGCATTTGGTGCTTATGGGATACTGAGGTCTAAGAAATTGAAGCCAGATCGTGTTGTATTCAATGCACTTATAGCTGCATGTGCTCGGTCAGGAGCAGTGGAGCGTGCTTTCGATGTTTTAGCAGAAATGGCTGCAGAATTGCAACCTATTGAACCAGATCACATAACTATTGGTGCATTAATGAAGGCATGTGCAAATGCCGGTCAGGTTGAACGAGCACGAGAAGTGTACAAGTTGTTAGACCAATATGGCATAAAGGGAACTCCAGAGGTCTACACTATTGCCATCAATGCTTGCAGCCAAACTGGAGATTGGCAATTTGCATGTGATGTATACAGTGACATGATTGGGAAAGGGGTTTTCCCGGATGAGATGTTTCTAAGTGCACTAATAGATTTTGCTGGACATGCTGGAAAGCTAGATGCTGCCTTTGAATTCCTACAAGAAGCTCGTAACCAAGGAATAAATATTGGAAAAGTGTCATACAGCTCTTTGATGGGAGCCTGTAGCAATACTGGAAATTGGGAGAAAGCATTAGAGCTATATGAGGATCTTAAGTCCCGTAAATTGGTGCATAGTGTTTCAACAGTGAATGCTTTGATCACTGCTCTGTGTGATGGGGATCAATTTCACAAGGCTATGGAGGTTTTGTTTGAAATGAAAGGATTGGGCCTATGCCCAAACAGCATCACATACTCAATACTTATAGTTGCAAGTGAGAAAAAGGACGATCTGGAAGCAGCTCAAATGCTCCTATCTCAAGCCAAAATGGATGGTGTCCCCCCTAATCCTGTCATGTGTAGATGTATAATCGGGATGTGCTTGAGGAGATATGAGAAGGCTTGCAATGTTGGTGAGCTATCTTTTGACTCAAGACAGCCAAATGTTAATAATAAATGGACATCACTGGCCTTAATGGTGTATCGTGAGATGATTAGAGATGGTACAGTGCCTACTAGTGAAATTCTGTCACGAATTTTTGGATGCCTCCAACTCCCTTATGATACCTCTTTGAAAAATAATCTTATTGAGAGCCTAGGAGTAAGTGCTGAAACTTCAAAAGACTCAAACCTCTGTTCATTGATTGATGGATTTGGTGAATATGATCCTCGTGCTTTTTCACTACTTGAGGAAGCTGCTTCTCTTGGAATTGTTCCATTCGTATCTTTTAAAGTGAATCCTATTGTTGCGGATTTAAAGGAATTGCACAATTTTACCGCTGAGGTATACCTCCTAACTGTTTTGAAGGGTCTCAAGCATCGACTTGCATCAGGCACATGGTTACCCAACTTAATCATCTTACTTCCAGTGGAGAAAACAAAAGTTGCAACTTCCAAGGGGGAGAAATTTATTAACGTTTCAGGAAGGGTTGGCCAGGCAGTTACAGCACTGTTGAGAAGGCTGAGAATACCATACCATGGCAGTGAATCGTTTGGAAAGATCAGAATTAATGGAGCAACTTTGAGAAGATGGCTTCAGCCAAAACTTGCATCTCCTTTCAGTGGAAACCCAGGTAACTTGAGCTTGTCACCGTCACGACTTGGCAAAGGTATCAGTCTTCAACAGCGGAATATTCGAACTGGCCATCTGACCTTGGATTAA 3327 0.4067 MEVSLTSNHYTFSLTSRSPSAFSLSSLRSIRTQFLGCSHNLRPPGCVRSRNNKCKKLRLLQLHSPRFIFKASLSSHSVVVVITLVTLSAVSLFYYNYIKRKKNSKEILGHPKFSLSQQGGNIGSQAIESQILCFPQFQGENLLKEIGILEDKSDRENHDFEGKETQLTYCAAPMVQEEAVVTEKLESPSDVLTSSVNTTSSSNTSKVVDESHLSAEFQSGPFEPLSFAAEMTELQVEETRDKARSDSELPIITNKHEHTASLDSLNNEFTIVKDRPKEKIELGHIDVLAGESARQELYMFYQVNMPSTGSMSPLNGLKSPPSHAFFMKKKELKSTMANSALKGPESLKEVSLEILENVEGVEPRASYKEGYSQQNGSHSLSKRNRSQSNRGKTDLDQKSNELLPQNSDSIWEHVDKENHHSQHLRTYNSLLKDGRLHECVEFLKDMEMKGILDMTKVYHAKFFNISKRQKAVREAFDYIKLIPDPKLSTFNMLMSVCSSSHNSEGAFEVLQLVQGAGFKPDCKLYTTLISTCAKSGKVDQMFEVFHNMVNSGIEPNVHTYGALIDGCARVGQVAKAFGAYGILRSKKLKPDRVVFNALIAACARSGAVERAFDVLAEMAAELQPIEPDHITIGALMKACANAGQVERAREVYKLLDQYGIKGTPEVYTIAINACSQTGDWQFACDVYSDMIGKGVFPDEMFLSALIDFAGHAGKLDAAFEFLQEARNQGINIGKVSYSSLMGACSNTGNWEKALELYEDLKSRKLVHSVSTVNALITALCDGDQFHKAMEVLFEMKGLGLCPNSITYSILIVASEKKDDLEAAQMLLSQAKMDGVPPNPVMCRCIIGMCLRRYEKACNVGELSFDSRQPNVNNKWTSLALMVYREMIRDGTVPTSEILSRIFGCLQLPYDTSLKNNLIESLGVSAETSKDSNLCSLIDGFGEYDPRAFSLLEEAASLGIVPFVSFKVNPIVADLKELHNFTAEVYLLTVLKGLKHRLASGTWLPNLIILLPVEKTKVATSKGEKFINVSGRVGQAVTALLRRLRIPYHGSESFGKIRINGATLRRWLQPKLASPFSGNPGNLSLSPSRLGKGISLQQRNIRTGHLTLD 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01825 1108 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 556 590 IPR002885 -
Accr1g01825 1108 Gene3D Tetratricopeptide repeat domain 451 574 IPR011990 GO:0005515
Accr1g01825 1108 Gene3D Tetratricopeptide repeat domain 735 867 IPR011990 GO:0005515
Accr1g01825 1108 FunFam Pentatricopeptide repeat-containing protein MRL1 chloroplastic 713 860 - -
Accr1g01825 1108 Pfam PPR repeat 593 618 IPR002885 -
Accr1g01825 1108 Pfam PPR repeat 428 451 IPR002885 -
Accr1g01825 1108 Pfam PPR repeat 488 517 IPR002885 -
Accr1g01825 1108 MobiDBLite consensus disorder prediction 365 402 - -
Accr1g01825 1108 Pfam Pentacotripeptide-repeat region of PRORP 636 778 IPR033443 -
Accr1g01825 1108 Gene3D Tetratricopeptide repeat domain 575 734 IPR011990 GO:0005515
Accr1g01825 1108 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 591 621 IPR002885 -
Accr1g01825 1108 Pfam PPR repeat family 521 569 IPR002885 -
Accr1g01825 1108 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 521 555 IPR002885 -
Accr1g01825 1108 NCBIfam pentatricopeptide repeat 558 591 IPR002885 -
Accr1g01825 1108 NCBIfam pentatricopeptide repeat 524 557 IPR002885 -
Accr1g01825 1108 NCBIfam pentatricopeptide repeat 631 661 IPR002885 -
Accr1g01825 1108 NCBIfam pentatricopeptide repeat 489 522 IPR002885 -
Accr1g01825 1108 NCBIfam pentatricopeptide repeat 666 699 IPR002885 -
Accr1g01825 1108 NCBIfam pentatricopeptide repeat 771 803 IPR002885 -
Accr1g01825 1108 NCBIfam pentatricopeptide repeat 735 766 IPR002885 -
Accr1g01825 1108 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 733 767 IPR002885 -
Accr1g01825 1108 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 768 802 IPR002885 -
Accr1g01825 1108 MobiDBLite consensus disorder prediction 368 386 - -
Accr1g01825 1108 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 803 837 IPR002885 -
Accr1g01825 1108 FunFam Pentatricopeptide repeat-containing protein MRL1, chloroplastic isoform X1 621 712 - -
Accr1g01825 1108 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 486 520 IPR002885 -
Accr1g01825 1108 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 628 662 IPR002885 -
Accr1g01825 1108 Pfam Pentatricopeptide repeat domain 791 849 IPR002885 -
Accr1g01825 1108 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MRL1, CHLOROPLASTIC 19 1107 - -
Accr1g01825 1108 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 663 697 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01825 Accr-Chr1 48605834 48619901 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01825 487 856 Glycosyltransferase AT1G05670 25.876 1.93e-35 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01825 - - gmx:100814164 1294.64