Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01809 ATGGGTTTTCGTGTCCCTAGAATTAGAAGGGCTTCTTCATTTTCAAGAAACCTTGCATCTTCCAAAGGAGGCAACGTGCCAAAGGGCTATCTTGCAGTCTACGTTGGAGAGAAAATGAAGAGGTTTGTGATTCCCATATCACACTTGAACCAACCTTCATTTCAAGATTTGTTGAGTCAAGCCGAGAAGGAGTTTGGTTATGATCACCCAATGGGCGGCCTAACAATTCCTTGCACTGAAGAGGACTTTGAGAGTGCAATTTCCTGCTTGATGAATGGCTAA 282 0.4362 MGFRVPRIRRASSFSRNLASSKGGNVPKGYLAVYVGEKMKRFVIPISHLNQPSFQDLLSQAEKEFGYDHPMGGLTIPCTEEDFESAISCLMNG 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01809 93 Pfam Auxin responsive protein 12 90 IPR003676 GO:0009733
Accr1g01809 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01809 Accr-Chr1 48483276 48483557 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01809 25 92 Calmodulin-binding Proteins AT3G43120 51.471 5.28e-20 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01809 - K14488 gmx:100816803 135.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g01809 1 48483276 48483557 Accr1g01809 1 48483276 48483557 ECH