Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01795 ATGAAGCCCCTCAAATTCTCTCACCTCACTCTATTCATCTTCTTCCTCGTAATGTTGCCCGATCCTGGAACCGCTCATGATTACAGAGAAGCACTGTCGAAAGCGATCTTGTTCTTCGAGGGCCAGCGATCGGGGTACCTGCCGGACGACCAGAGAATGAAATGGAGAGGCCATTCAGGGCTGAGCGACGGCTGGGATTACAACACAGACCTCACCGGCGGCTACTACGACGCTGGCGACAACGTCAAGTTTGGGTTCCCGATGGCGTTCACCGCCACAATGCTGGCTTGGAGCGTCGTCGAATTCGGAGATGAGATGCCTCGTCAGGAGCTTTGGAATTGCCTCGTCGCTATTCGCTGGGCCACCGATTATCTGCTCAAGACTGTGTCTCAGCCCGATCGGATTTTTGTTCAGGTGGGGGATCCGAGCTCAGACCATAACTGTTGGGAGAGGCCAGAGGACATGGACACAGACAGGACGGTCTACGCCATTGATGCGCCGAATCCAGCTTCCGACGTTGCCGGTGAAACAGCGGCGGCACTGGCCGCTTCTTCCATGGCGTTCCGGTCGTCGGACCCTGGATATTCCGAGACACTGCTACGAAATGCGATCAAGGCATTTCAGTATGCTGATAACTACAGAGGTGCTTACACGGACAATGATCATGTTAGGGAAGGTGCTTGCCCTTATTACTGCAACTTTGGAGGCTACCAGGACGAGCTGTTATGGGGAGCAGCATGGCTAAGGAGGGCAACAGGGGACGATGATTTCTTAAACTACCTTCAATTCAATGCCAAAGCTTTCGGTGCTGAAGAGAACATCAATGAGTTTGGCTGGGAAAACAAGCATGCTGGCCTTAAAGTACTTGTCTCCAAGGAAGTAGTAGAAGAAAGCATGGTCTCTCTACAATCCTATAGGGAGTCAGCAGAGAGCTTCATATGCACACTGGTACCTGAATCACCAGCCTCACAAATCCAATACACTCCTGGAGGCCTCATTTACAGACCTGGAGGCAGCAATTTACAGCATTCAACTTCTCTCTCCTTCCTCCAACTCGTGTACGCCAACTATCTCTCTCGCTCCTCCCAAACCCTAACTTGTGGGACCCTCTCCGACATCACTCCAGCCACCCTCCGTCGCATCGCCAAGAGGCAAGTTGACTACATCCTCGGCGACAACCCCATGGGACTGTCCTACATGGTCGGATACGGCGACCACTACCCTCAGAGGATCCACCACCGTGGCTCTTCTCTTCCTTCTGTTAAGGACCACCCTCAGTTCATCGCTTGCAAGGAAGGCTCTGTCTATTTCAATTCTTCTAACCCTAACCCAAATCTTCTTGTCGGGGCTCTTGTCGGAGGGCCTGAGGAAGATGATGAGTACGAGGATGATCGAGCTAATTTCAGAAAGTCTGAGCCAACTACCTACATTAATGCTCCTTTTGTTGGGGTTTTAGCGTACTTTGCTGCTCATCCTGACCCTTGA 1485 0.5199 MKPLKFSHLTLFIFFLVMLPDPGTAHDYREALSKAILFFEGQRSGYLPDDQRMKWRGHSGLSDGWDYNTDLTGGYYDAGDNVKFGFPMAFTATMLAWSVVEFGDEMPRQELWNCLVAIRWATDYLLKTVSQPDRIFVQVGDPSSDHNCWERPEDMDTDRTVYAIDAPNPASDVAGETAAALAASSMAFRSSDPGYSETLLRNAIKAFQYADNYRGAYTDNDHVREGACPYYCNFGGYQDELLWGAAWLRRATGDDDFLNYLQFNAKAFGAEENINEFGWENKHAGLKVLVSKEVVEESMVSLQSYRESAESFICTLVPESPASQIQYTPGGLIYRPGGSNLQHSTSLSFLQLVYANYLSRSSQTLTCGTLSDITPATLRRIAKRQVDYILGDNPMGLSYMVGYGDHYPQRIHHRGSSLPSVKDHPQFIACKEGSVYFNSSNPNPNLLVGALVGGPEEDDEYEDDRANFRKSEPTTYINAPFVGVLAYFAAHPDP 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01795 494 FunFam Endoglucanase 24 492 - -
Accr1g01795 494 PANTHER ENDO-1,4-BETA-GLUCANASE 19 489 - -
Accr1g01795 494 Gene3D - 24 491 IPR012341 GO:0005975
Accr1g01795 494 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 388 414 IPR018221 -
Accr1g01795 494 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 461 479 IPR033126 -
Accr1g01795 494 Pfam Glycosyl hydrolase family 9 28 485 IPR001701 GO:0004553|GO:0005975
Accr1g01795 494 SUPERFAMILY Six-hairpin glycosidases 14 490 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01795 Accr-Chr1 48225191 48229195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01795 9 493 Glycoside Hydrolase AT4G39000 59.671 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01795 K01179 - gmx:100101849 793.497