Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01761 ATGGCCAGTGATTCTGCAGTAATGTCCAATGGCAATGCCAACTCACATCCTGATCCACAGAGGAATTACCAAGTGGTTGTAGCTGCAACCCGAGATAAGGGTATTGGTAAGGATGGAAAACTACCATGGAGACTGCCTGGTGATCTCAAATTTTTTAAGGAGATCACTTCAATGACATCTGATCCTGGGAAGAAGAATGCAGTGATAATGGGTAGAAAAACATGGGAGAGTATCCCTCTGGAGAATCGCCCTCTGCCTGGACGCCTTAATGTTGTTCTTACTCGCTCAGGAAGCTTTGACATTGCAACTGCAGAGAATGTTGTTATATGTGGAAGCATGTCCTCCGCATTGGAATTGTTAGCTGCATCTCCTTACTGTCTATCAATTGAGAAAGTGTTTGTTATAGGAGGTGGCCAGATATTTAGTGAGGCTCTAAATGCACCTGCATGTGAAGCTGTTCACATTACTGAAATCGAGACAAATATTGAGTGTGATACTTTCATGCCTCCAATTGATTCCTCTGTATTTCAGCCATGGTACTCTTCATTTCCTAGGGTGCAGAGCAACATTCGCTATTGTTTTACCACATATGTACGAGTTAGGAGTTCTATAACAGAATCCTTGAGTCAGAATTCTGATCAAAATTGTGATCCTAGATCAGATCCCTCAAAATTTGAGGTCAAGAACTTCTATTTCCTTCCTAAAATGATTTTTGAGAGACATGAGGAGAACATTTATCTCAATCTGGTCCAAGAAATCATCTCTGAAGGCACTGCTAAGGATGATAGGACTGGGACTGGCACCTTCTCAAAATTTGGTTGCCAGATGAGGTTTAATTTGCGCAGAAGCTTTCCTCTTTTAACAACTAAGAAAGTATTTTGGCGAGGGGTTGTTGAAGAGCTTCTTTGGTTTATAAGTGGTTCAACAAATGCGAAGGTGCTGCAGGAAAAAGGCATCCATATATGGGATGGCAATGCATCCCGTGAATACCTCGATAGCGTTGGATTGTCAGAGAGGGAGGAGGGTGACTTGGGACCTGTTTACGGGTTCCAGTGGAGGCACTTTGGTGCCAAGTATACTGACATGCATGCTGACTACTCTGGCAAAGGATTTGATCAACTTTTAGATGTCACTAACAAGATCAAGCTTAATCCTGATGATCGGCGGATTATTCTCTCAGCTTGGAATCCAGTAGATCTTAAATTGATGGCCCTTCCTCCCTGCCACATGTTTGCACAGTTCTATGTAGCCAATGGGGAGTTATCTTGTCAAATGTATCAGCGATCTGCAGACATGGGCCTGGGTGTGCCCTTTAATATTGCATCTTATGCTCTCCTGACATGCATGATTGCTCAAGTTTGTGATCTTGTTCCGGGTGATTTTGTCCATGTTATTGGGGATGCACATGTTTACCGCAATCACGTGCGACCTTTGCAGGAGCAGCTTCGGAACCTTCCTAAACCTTTTCCCATTTTGAAGATAAATCCAAAGAAGGATATAGATTCTTTTGTGGCTTCTGATTTCGAACTGATAGGCTATGATCCTTACCAGAAGATAGAGATGAAGATGGCTGTGTAA 1578 0.4284 MASDSAVMSNGNANSHPDPQRNYQVVVAATRDKGIGKDGKLPWRLPGDLKFFKEITSMTSDPGKKNAVIMGRKTWESIPLENRPLPGRLNVVLTRSGSFDIATAENVVICGSMSSALELLAASPYCLSIEKVFVIGGGQIFSEALNAPACEAVHITEIETNIECDTFMPPIDSSVFQPWYSSFPRVQSNIRYCFTTYVRVRSSITESLSQNSDQNCDPRSDPSKFEVKNFYFLPKMIFERHEENIYLNLVQEIISEGTAKDDRTGTGTFSKFGCQMRFNLRRSFPLLTTKKVFWRGVVEELLWFISGSTNAKVLQEKGIHIWDGNASREYLDSVGLSEREEGDLGPVYGFQWRHFGAKYTDMHADYSGKGFDQLLDVTNKIKLNPDDRRIILSAWNPVDLKLMALPPCHMFAQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAQVCDLVPGDFVHVIGDAHVYRNHVRPLQEQLRNLPKPFPILKINPKKDIDSFVASDFELIGYDPYQKIEMKMAV 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01761 525 SUPERFAMILY Thymidylate synthase/dCMP hydroxymethylase 203 525 IPR036926 -
Accr1g01761 525 CDD DHFR 26 198 IPR001796 GO:0004146|GO:0046654
Accr1g01761 525 MobiDBLite consensus disorder prediction 1 22 - -
Accr1g01761 525 Gene3D Dihydrofolate Reductase, subunit A 4 201 IPR024072 -
Accr1g01761 525 Pfam Thymidylate synthase 245 525 IPR023451 -
Accr1g01761 525 FunFam Possible thymidylate synthase 237 525 - -
Accr1g01761 525 ProSitePatterns Thymidylate synthase active site. 388 416 IPR020940 GO:0004799|GO:0006231
Accr1g01761 525 FunFam Bifunctional dihydrofolate reductase-thymidylate synthase 5 200 - -
Accr1g01761 525 MobiDBLite consensus disorder prediction 1 21 - -
Accr1g01761 525 Pfam Dihydrofolate reductase 24 199 IPR001796 GO:0004146|GO:0046654
Accr1g01761 525 CDD TS_Pyrimidine_HMase 245 479 IPR023451 -
Accr1g01761 525 PANTHER THYMIDYLATE SYNTHASE 1 46 525 IPR045097 GO:0016741
Accr1g01761 525 Gene3D Thymidylate synthase/dCMP hydroxymethylase domain 233 525 IPR036926 -
Accr1g01761 525 NCBIfam thymidylate synthase 245 525 IPR000398 GO:0004799|GO:0006231
Accr1g01761 525 PIRSF DHFR-TS 5 525 IPR012262 GO:0004146|GO:0004799|GO:0006730
Accr1g01761 525 ProSitePatterns Dihydrofolate reductase (DHFR) domain signature. 34 56 IPR017925 GO:0004146
Accr1g01761 525 SUPERFAMILY Dihydrofolate reductase-like 21 199 IPR024072 -
Accr1g01761 525 PRINTS Thymidylate synthase family signature 459 476 IPR000398 GO:0004799|GO:0006231
Accr1g01761 525 PRINTS Thymidylate synthase family signature 421 447 IPR000398 GO:0004799|GO:0006231
Accr1g01761 525 PRINTS Thymidylate synthase family signature 284 305 IPR000398 GO:0004799|GO:0006231
Accr1g01761 525 PRINTS Thymidylate synthase family signature 403 418 IPR000398 GO:0004799|GO:0006231
Accr1g01761 525 PRINTS Thymidylate synthase family signature 377 396 IPR000398 GO:0004799|GO:0006231
Accr1g01761 525 ProSiteProfiles Dihydrofolate reductase (DHFR) domain profile. 22 199 IPR001796 GO:0004146|GO:0046654
Accr1g01761 525 Hamap Thymidylate synthase [thyA]. 243 525 IPR000398 GO:0004799|GO:0006231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01761 Accr-Chr1 47730446 47733886 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01761 K13998 - cit:102610005 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g01761 1 47730446 47733886 Accr1g01761 1 47730446 47733886 ECH