Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00444 ATGGCTTCTCTAAATGAACCTCTATTCCCGATAGCTGTTTTGATTGATGAATTGAAGAACGATGATATTCAGATTAGGCTGAATTCGATTCGCAACTTATCCACAATTGCAAGCGCACTTGGGGAGGAAAGGACCAGGACGGAATTGATCCCATTTCTCAGTGAGAACAACGATGATATTGATGATGATGAGTTGCGTCTTGCAGTGGCAGAGGAATTAAGCAGGTTTATTCCATGTGTTGGTGGCATAGAGCACGCGGACGTGCTGCTTCCTCCATTAGAAACGCTCTGCACCGTGGAGGAAACTTGTGTGAGGGACAAAGCGGTGGAGTCACTTTGTAAAATTGGGGCTCAAATGAGAGAGAAGGAAATGGTTAAATCCTTTATTCCTCTAGTCAAGAAGCTGGCTGCTGGTGAGTGGTTTACAGCTCGAGTTTCATCATGCAGTTTGTTGCATATTGCTTACCCGCATGCCCCAGAGACCATAAAAACTGAACTGAGAACTTTATATGGTCAGCTGTGCCAAGATGAAACGCCTATGGTTAGAAGATCTGCTGCAGCAAACCTGGGAAAGTTTGCTTCTATTGTTGAAGCTGCTTACCTGAAAACCAATATCCTGTCCAAATTTAAGGATCTTGCACATGACGATCAAGATTCAGTTCGGCTACTTTCTGTTGGGGGTTGTGTAGCTCTTGGGAAATTGTTAGAGCCTCAAGATTGTGTGGCACATATTCTTCCAGTTATAGTCAAATTCTCACAGGATGAGTCATGGCGTGTACGCTACATGGCTGCTGATCACTTATATGAGCTATGTGAAGTTGTTGGTCATGAGTCCACCAGGTCAGACTTGGTTTCTGCGTATGTTCGGCTACTGTGTGACAATGAAGCTGAAGTACGGATTGCTGCTGCTGGAAATGTGACCAAGTTTTGCCAATTATTAAGTCCAGAACTTGCTATTCAGCACATTGTACCATGTTTAAAGGATTTATCTACTGAGTCATGTCAGTATGTTCGCTCTGCGTTGGCTTCAGTTGTAATGGGAATGGCATCACTTTTAGGGAAGGAGGCGACAATTGAGCAACTCCTCCCTATTTTTCTTTCTCTTTTGAAAGATGAAAGCCCTGATGTCAGGCTGAACATCATCAGCAAGCTTGACCAAGTTAATCAGGTAATTGGTATTGACCTGTTATGCCAGTCTCTATTACCAGCTATTGTTGAGCTTGCTGAACATCGACAGTGGAGGGTTCGACTTGCCATCATAGAACATGTACCCTTGTTGGCAACTCAGTTAGGTATAGAGCTTTTTGATGATAAACTTGGACCCCTTTGCATGCAATGGCTTAAGGACAAGGTATACTCTATTCGAGAAGCGGCTGCAGAAAATGTGAAACGCTTAGCAGAAGAGTTTGGAACAGAATGGTCAATGCAGCACATTATTCCTCAGGTTCTGGACATGATTAATGATCCACACTATCTGAATCGGATGACTGTTCTGCAAGCAATTTCTCTTCTGGGTCCTGTTGTGGGCCCTGAGATTAGCTGTTCAAAACTGCTCCCTCTGGTCATCAATGCATCAAAAGATAGCGTTCCCAATGTCAAGTTCACCGTTGCAAACGTGTTGCAGTCTCTTGCTCCAGTTGTTGATCAGTCTGTTGTTGAGCAGACTATACGTCCCTCTTTGGTTGAGCTGACCGAGGATCCAGATGTTGATGTTAGGTTCTTTGCCTCCAAAGCGCTCAATGAAATCACAGTATCCAGTTAG 1761 0.4401 MASLNEPLFPIAVLIDELKNDDIQIRLNSIRNLSTIASALGEERTRTELIPFLSENNDDIDDDELRLAVAEELSRFIPCVGGIEHADVLLPPLETLCTVEETCVRDKAVESLCKIGAQMREKEMVKSFIPLVKKLAAGEWFTARVSSCSLLHIAYPHAPETIKTELRTLYGQLCQDETPMVRRSAAANLGKFASIVEAAYLKTNILSKFKDLAHDDQDSVRLLSVGGCVALGKLLEPQDCVAHILPVIVKFSQDESWRVRYMAADHLYELCEVVGHESTRSDLVSAYVRLLCDNEAEVRIAAAGNVTKFCQLLSPELAIQHIVPCLKDLSTESCQYVRSALASVVMGMASLLGKEATIEQLLPIFLSLLKDESPDVRLNIISKLDQVNQVIGIDLLCQSLLPAIVELAEHRQWRVRLAIIEHVPLLATQLGIELFDDKLGPLCMQWLKDKVYSIREAAAENVKRLAEEFGTEWSMQHIIPQVLDMINDPHYLNRMTVLQAISLLGPVVGPEISCSKLLPLVINASKDSVPNVKFTVANVLQSLAPVVDQSVVEQTIRPSLVELTEDPDVDVRFFASKALNEITVSS 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00444 586 Pfam HEAT repeat 172 195 IPR000357 GO:0005515
Accr1g00444 586 ProSiteProfiles HEAT repeat profile. 556 586 IPR021133 -
Accr1g00444 586 ProSiteProfiles HEAT repeat profile. 244 282 IPR021133 -
Accr1g00444 586 FunFam Serine/threonine-protein phosphatase 2A regulatory subunit A alpha isoform 2 583 - -
Accr1g00444 586 ProSiteProfiles HEAT repeat profile. 283 321 IPR021133 -
Accr1g00444 586 ProSiteProfiles HEAT repeat profile. 166 204 IPR021133 -
Accr1g00444 586 ProSiteProfiles HEAT repeat profile. 517 555 IPR021133 -
Accr1g00444 586 ProSiteProfiles HEAT repeat profile. 400 438 IPR021133 -
Accr1g00444 586 ProSiteProfiles HEAT repeat profile. 478 516 IPR021133 -
Accr1g00444 586 Gene3D - 2 585 IPR011989 -
Accr1g00444 586 Pfam HEAT repeats 363 462 - -
Accr1g00444 586 SUPERFAMILY ARM repeat 9 581 IPR016024 -
Accr1g00444 586 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 4 583 - -
Accr1g00444 586 ProSiteProfiles HEAT repeat profile. 322 360 IPR021133 -
Accr1g00444 586 ProSiteProfiles HEAT repeat profile. 10 48 IPR021133 -
Accr1g00444 586 ProSiteProfiles HEAT repeat profile. 361 399 IPR021133 -
Accr1g00444 586 ProSiteProfiles HEAT repeat profile. 439 477 IPR021133 -
Accr1g00444 586 Pfam Vacuolar 14 Fab1-binding region 229 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00444 Accr-Chr1 8661163 8670087 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00444 K03456 - jre:109013629 934.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g00444 1 8661163 8670087 Accr1g00444 1 8661163 8670087 ECH