Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00394 ATGGCAGATCAAAACCCAAAACCAGAGCTTTTTGAGCTCAACAATGGAACCATGCATGTCCTCGTCACCAATGTCGGCTGCGCTATCACTTCCTTATCGGTGCCTGGCAAAAATGGAAAATTGTCTGACGTTGTTCTGGGGTTCGACTCAGTTGATCCATATCTGAAAGGTCTTGCTCCTTATTTTGGCTGCATTGTGGGTCGGGTCGCGAACAGAATTAAAGATGGGAAGTTTACACTTGACGGGGTTCAATACTCTTTGCCTGTCAACAAACCCCCAAACAGTCTCCATGGTGGTAACGTGGGGTTTGATAAGAAGGTGTGGGAGGTTGTTGAATATAGAAAAGGTGAAACTCCTACGATCACTTTTAAGTATCACAGCCATGATGGGGAGGAAGGTTATCCTGGTGACCTCACTGTTACTGCAACTTACACACTCACTTCTACGACAACTATAAGGCTTGACATGGAAGCAGTGCCAAAGGATAAGGCCACTATAGTGAACTTAGCTCAGCATACATACTGGAACTTAGCAGGCCACAGCTCGGGGAACATTCTCGATCATTCAATTCAGATATGGGCTAATCATATCACTCCTGTGGATGAGAATACCGTACCAACGGGTGAAATTAAGCCAGTGAAGGATACCCCATTTGATTTTACATCTGAGAGGAGGATAGGCGACACCATCGATCAGGTTGGAATAGGGTATGACCACAATTACGTGCTTGGGGGTGGCGATCTGAAGCAAGGTTTAACACTTGCTGCAAAATTGAGGGATCCCTCAAGTTCAAGGGTTTTGAAGCTGTGGACAGATGCCCCAGGCATGCAATTCTACACCGGTAACTATGTCAACGGTGTTTCTGGAAAAGAAGCTACCGTTTATGAAAAGCATGCAGGGCTGTGCTTGGAGACGCAGGGGTTCCCTAATGCCATAAACCAGCCAAATTTCCCGTCTGTGGTCGTCCGACCTGGTCAGAAATACCAACATTCCATGTTGTTTGAGTTTTCAGTTGAGTGA 1020 0.4618 MADQNPKPELFELNNGTMHVLVTNVGCAITSLSVPGKNGKLSDVVLGFDSVDPYLKGLAPYFGCIVGRVANRIKDGKFTLDGVQYSLPVNKPPNSLHGGNVGFDKKVWEVVEYRKGETPTITFKYHSHDGEEGYPGDLTVTATYTLTSTTTIRLDMEAVPKDKATIVNLAQHTYWNLAGHSSGNILDHSIQIWANHITPVDENTVPTGEIKPVKDTPFDFTSERRIGDTIDQVGIGYDHNYVLGGGDLKQGLTLAAKLRDPSSSRVLKLWTDAPGMQFYTGNYVNGVSGKEATVYEKHAGLCLETQGFPNAINQPNFPSVVVRPGQKYQHSMLFEFSVE 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00394 339 CDD galactose_mutarotase_like 10 336 IPR047215 GO:0016853
Accr1g00394 339 PANTHER ALDOSE-1-EPIMERASE 8 338 - -
Accr1g00394 339 PIRSF GALM 1 339 IPR015443 GO:0016853|GO:0019318
Accr1g00394 339 Gene3D - 1 339 IPR014718 GO:0030246
Accr1g00394 339 Pfam Aldose 1-epimerase 10 334 IPR008183 GO:0005975|GO:0016853
Accr1g00394 339 FunFam Aldose 1-epimerase 2 338 - -
Accr1g00394 339 SUPERFAMILY Galactose mutarotase-like 6 337 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00394 Accr-Chr1 7556935 7559395 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00394 7 337 Miscellaneous Gene Families AT3G47800 49.547 5.95e-107 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00394 K01785 - gmx:100776238 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g00394 1 7556935 7559395 Accr1g00394 1 7556935 7559395 ECH