Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00204 ATGAGCTTTGCAGCTTACAAGATGATGCACTGCCCGACGGGCATCGAGAATTGCGCTTCTGGGTTCATCACGCATTCTCGCGCCGACGTCGTACCACAAATCTCTCCGATTCAAACCGATGACCTTGACTCAGAGTGGCCAGCAAGGCGCGAAATGGGTCCCATTCCGAACCTCATTGTTACTGCGGCGAATGTCCTGGAAGTGTACATTGTGAGGGTGCAAGAAGAAGTTAGAAGAGAGCCGAAGGGTAATGTGGAACCCAAGCGGGGTGGTCTCATGGACGGCGTTGCTGGGGCCTCGCTTGAGCTTGCTTGTCATTACAGGTTGCACGGTAATATCGAAACTATGGAGGTATTGAGCGTTGGAGGTGCTGAAGCTTCTAGGAAGAGAGATTCTATCACCTTAACTTTTAAAGATGCAAAAATTTCAGTTCTGGAGTATGATGATTCTATTCATGGACTTCGAATAAGTTCTTTGCATTGTTTTGAGGGTCCGGAGTGGCTCCATTTAAAAAGAGGCAGAGAACAATTTGCAAGAGGCCCATTGGTAAAGGTTGATCCTCAAGGCAGGTGTGGCGGAGTTCTTGTCTATGATTTGCAAATGATTATACTTAAGGCTACTCAGGCTGGATCTGGTTTAGTTGGAGAGGATGATGCCTTGGGTTCTGGAGGTGCAGTTGCTGCTCGTATTGAGTCTTCTTATATGATGACTCTTCGAGACTTAGACATGAGACATGTAAAAGATTTTACGTTTGTACATGGATATATTGAACCTGTGATGGTGATACTGCATGAAAGGGAGCTTACTTGGGCTGGGTGTGTCTCATGGAAGCATCACACCTGCATGATATCTGCTCTGAGTATCAGTACAACTTTGAAGCAGCATCCACTCATATGGTCAGCTGCGAATCTTCCTCATGATGCGTACAAGCTTCTTGCAGTGCCATCACCAATAGGTGGTGTTCTTGTGTTTGGTGCTAATACTATTCATTATCACAGTCAGTCTGCTTCATGTGCATTGGCGTTGAATAGTTATGCTGTTTCACATGACAGTAGTCAAGAGATGCCAAGATCGAGTTTTAACGTGGAACTTGATGCTGCCTATGCAACTTGGTTGTTGAGTGATGTGGCCTTGCTGTCAACAAAAACTGGTGAATTGTTGCTGCTTACTCTTGTTTATGATGGAAGGGTTGTCCAGAGGCTTGATCTTTCCAAATCAAAAGCTTCAGTATTATCTTCTGGCATCACAACAATTGGGAATTCTTTGTTTTTCCTCGCTAGCCGACTAGGAGACAGTATGCTAGTGCAATTTTCTTGTGGATCCGGGGTTTCAATGCTGTCGTCCAATCTAAAGGAAGAGGTTGGTGATATAGAAGGTGACGCTCCTTCAGCAAAGAGACTACGCAGGTCCCCTTCTGATGCTTTACAAGATATGCTTAGTGGTGAGGAGCTCTCACTGTTTGGATCTACCCCAAATAAAACGGAATCAGCACAGAAAACCTTCTCATTTGCAGTGAGGGATTCGTTGATTAATGTTGGTCCTTTGAAAGACTTCTCATATGGTTTACGGATAAATGCTGATGCAAATGCAACTGGAATTGCAAAACAAAGTAACTATGAACTGGTATGCTGTTCTGGTCATGGAAAGAATGGTTCACTCTGTGTTCTTCGGCAATCAGTTCGTCCAGAAGTGATAACTGAGGTTGAACTTCCTGGTTGCAAAGGAATTTGGACTGTTTATCACAAGAACACACGCTCTCATAACACTGATTCTTCTAAGTTGGCAGATGACGATGATGAGTATCATGCGTATCTTATCATAAGTTTGGAGGCTCGTACTATGGTACTGGAAACAGCTGATCTTCTGAGTGAGGTTACTGAAAGTGTTGACTATTATGTTCAAGGAAAGACGCTTGCTGCAGGGAACTTGTTTGGAAGGCGTCGAGTAATTCAAGTTTATGAACGTGGTGCTCGCATTCTAGATGGCTCATTTATGACCCAAGATGTAAGCTTTGGAGCTTCAAACTCTGAATCAAGTTCTGGATCTGAGAATGCTGTTGTGTCATCTGTCTCTATTGCTGATCCATATGTATTACTCAGAATGAGTGATGGAAGTATTCGACTTTTGTTTGGAGATCCTACTACCTGCACCGTTTCTGTTACAACTCCTTCATTTGAAAGCTCAAAAATATCAGTATGTGCAAGCTCAAAAAAATCAGTATCTGCCTGCACGCTTTACCATGATAAAGGACCTGACCCATGGCTAAGGAAGACAAGAACTGATGCATGGCTTTCTACTGGTGTTGGTGAGGCAATTGATGGCACTGATGGTGCAGTTCAAGATCATGGGGATATTTATTGTGTTGTTTGTTATGAAAACGGTTCTCTTGAAATGTTTGATACCCCAAATTTCAGTTGTGTTTTTTCTGTGGAAAAATTTATGTCTGGAAAGAGCCACCTTGTTGATACTCTGGTGGAGGAAGTTGATGGAGGTTCTGGTGAATTGACTAACCAAGGCAGGAAGGATAATTTACAGAGTATGAAGGTTGTAGAGTTGGCCATGCAGAGATGGTCAGGGCAGTATAGCCGGCCATTTCTTTTTGGGATCTTGAGTGATGGAACAATTCTTTGCTACCATGCTTACTTTTATGAAGGTTCAGATGGTACTACCAAGGTTGAGGATTCAGCATCTGCACAAGGACCTGTGGGTGTAAATGGCACTAATGCTTCTAGGCTTAGAAATTTGAGATTTCTTCGTGTACCCTTAGATATATATGCTAGGGAGGAGATATCAAGTGGATCTCATTCCCAGAGAATTACTATTTTCAAGAATATAGGTGGTTACCAAGGATTTTTCTTGTTGGGGTCTAGACCTGCTTGGGTTATGGAGCTGAGAGAACGGCTTCGTGTTCATCCACAGCTGTGCGATGGGTCTATTGTTGCTTTTACTGTCCTTCACAATGTGAACTGCAATCATGGTCTCATATATGTTACGTCACAGGGTGTTTTAAAGATCTGCCAACTGCCTTCTGACTCAAGCTATGATAACTACTGGCCTGTACAGAAAATTCCTCTAAAAGCTACTCCTCATCAAGTAACCTACTATGCAGAGAAGAATTTGTATCCGCTTATAGTCTCAGTTCCGGTTCTCAAGCCACTTAATCAAGTTATTTCATCTTTGGGTGATCAAGACCAACAAACTGAGAATCAAAATCTGGGCTCTGATGAGCAAAACCGCTTTTACACTATTGATGAATTTGAGATCCGTATTATGGAGCCAGATAAATCTGGTGGCCCTTGGCAAACAAAAGCAACTATACCTATGCAAAGTTCTGAAAATGCCCTTACTGTGAGAATGGTTACACTGCTGAATACAGAAACAAAAGAGAATGAAACACTTTTAGCTATTGGCACTGCTTATGTGCAAGGAGAGGATGTTGCTGCAAGAGGGCGTGTCCTCCTGTTTTCTTTGGGAAAAATCACCGATAGTAGTCAACCTCTGGTTTCAGAGGTCTACTCAAAAGAGTTGAAAGGTGCTATATCTGCTTTGGCCTCGCTACAAGGTCATCTATTAATAGCTTCTGGCCCAAAAATTATTCTGCACAAGTGGACTGGTAGTGAGCTGAACGGTATTGCATTTTTTGATGCTCCACCATTGCATGCTGTGAGCTTAAACATTGTCAAAAACTTTATACTCATTGGTGACATCCACACAAGCATTTACTTCCTTAATTGGAAGGAACAGGGTGCTCAACTTAGCTTATTAGCGAAGGACTTTGGTTCTCTTGATTGTTTTGCAACCGAGTTTTTGATTGATGGAAGCACTCTGAGTCTCATGGTTTCAGATGATCAAAAGAACATCCAGATTTTTTACTATGCACCAAAGATGTCTGAAAGCTGGAAGGGACAGAAGCTTCTTTCAAGGGCTGAATTTCATGTTGGAGCACATGTGACTAAATTCTTGCGTTTGCAGATGCTGTCCACTGCCTCTTCTGACCGGACTGGCACTGGTCCAAGCTCAGATAAAACAAATCGTTTTGCTTTGTTATTTGGTACCCTGGATGGCAGTATCGGTTGCATTGCACCAGTGGATGAAATCACATTTCGGAGGCTGCAATCTTTGCAGAAAAAGCTTGTTGATTCTGTACCTCATGTTGCTGGCCTAAATCCAAAAGCTTTCAGACAGTTTCGTTCCAATGGAAAGGCTCATCGACCGGGTCCTGACAGTATAGTTGACTGTGAGCTGCTATGCCATTATGAAATGCTTCGATTGGAGGAACAGCTCGAAATTGCTCATCAGGTTGGAACAACCCGATCGCAAATTTTATCAAATCTGATTGACCTGTCTATTGGAACAAGCTTTTTGTGA 4368 0.4286 MSFAAYKMMHCPTGIENCASGFITHSRADVVPQISPIQTDDLDSEWPARREMGPIPNLIVTAANVLEVYIVRVQEEVRREPKGNVEPKRGGLMDGVAGASLELACHYRLHGNIETMEVLSVGGAEASRKRDSITLTFKDAKISVLEYDDSIHGLRISSLHCFEGPEWLHLKRGREQFARGPLVKVDPQGRCGGVLVYDLQMIILKATQAGSGLVGEDDALGSGGAVAARIESSYMMTLRDLDMRHVKDFTFVHGYIEPVMVILHERELTWAGCVSWKHHTCMISALSISTTLKQHPLIWSAANLPHDAYKLLAVPSPIGGVLVFGANTIHYHSQSASCALALNSYAVSHDSSQEMPRSSFNVELDAAYATWLLSDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLSSGITTIGNSLFFLASRLGDSMLVQFSCGSGVSMLSSNLKEEVGDIEGDAPSAKRLRRSPSDALQDMLSGEELSLFGSTPNKTESAQKTFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVCCSGHGKNGSLCVLRQSVRPEVITEVELPGCKGIWTVYHKNTRSHNTDSSKLADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQVYERGARILDGSFMTQDVSFGASNSESSSGSENAVVSSVSIADPYVLLRMSDGSIRLLFGDPTTCTVSVTTPSFESSKISVCASSKKSVSACTLYHDKGPDPWLRKTRTDAWLSTGVGEAIDGTDGAVQDHGDIYCVVCYENGSLEMFDTPNFSCVFSVEKFMSGKSHLVDTLVEEVDGGSGELTNQGRKDNLQSMKVVELAMQRWSGQYSRPFLFGILSDGTILCYHAYFYEGSDGTTKVEDSASAQGPVGVNGTNASRLRNLRFLRVPLDIYAREEISSGSHSQRITIFKNIGGYQGFFLLGSRPAWVMELRERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGVLKICQLPSDSSYDNYWPVQKIPLKATPHQVTYYAEKNLYPLIVSVPVLKPLNQVISSLGDQDQQTENQNLGSDEQNRFYTIDEFEIRIMEPDKSGGPWQTKATIPMQSSENALTVRMVTLLNTETKENETLLAIGTAYVQGEDVAARGRVLLFSLGKITDSSQPLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGSELNGIAFFDAPPLHAVSLNIVKNFILIGDIHTSIYFLNWKEQGAQLSLLAKDFGSLDCFATEFLIDGSTLSLMVSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTASSDRTGTGPSSDKTNRFALLFGTLDGSIGCIAPVDEITFRRLQSLQKKLVDSVPHVAGLNPKAFRQFRSNGKAHRPGPDSIVDCELLCHYEMLRLEEQLEIAHQVGTTRSQILSNLIDLSIGTSFL 1455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00204 1455 FunFam Cleavage and polyadenylation specificity factor subunit 1 53 446 - -
Accr1g00204 1455 Gene3D - 976 1362 IPR015943 GO:0005515
Accr1g00204 1455 Gene3D - 54 448 IPR015943 GO:0005515
Accr1g00204 1455 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 172 708 IPR018846 -
Accr1g00204 1455 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 8 1440 - -
Accr1g00204 1455 Pfam CPSF A subunit region 1086 1420 IPR004871 GO:0003676|GO:0005634
Accr1g00204 1455 FunFam cleavage and polyadenylation specificity factor subunit 1 976 1362 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00204 K14401 - gmx:100785543 2466.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g00204 1 3765688 3787767 Accr1g00204 1 3765688 3787767 ECH