Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01714 ATGGAATATGATGGTGAATATGGATCAGAAGTTTCTGATATAATATCGACTAATCAACAGAGAAGGAAGCAGTCTTTTATTCGGAAAATTTTCACCGTGAAGGAGAGAAATGGAAGGGAGGCTGGTGGAATTTCAGTTGATACCCTTGAAGCACTATCTGACCCGTCCTTCAAAAATCATTATTTTAGCTGCACAGAGCTTCCTATGTCTTCTGGTGAAGAAATTCAGAATTTAAGAGTGTTTGTAGCAACATGGAATGTAGGAGGGCAATGTCCCAATGGGAACCTTGACCTGAGCGACTTTCTTCAGGTCAGAAATGAACCAGATATATATGTGTTGGGTTTTCAGGAAATCGTCCCCTTAAATGCAGGAAATGTGCTGGTATTAGAGGATAATGAGCCTGCTGCGAAATGGCTTGCTTTGATCAATCATTCTTTGAATGGAACTTCTCGTTTAGCTTCGAAGGGACTAAAACACACGGCATCATTTGGTGGATCATTATTCTTTCAAAAGCCCACTTATAGGAAGCTTAAGAAGACATTGAGGACATTAGATGGAAAGAGGTTAAAAGGGTGTAACTGTGTTCTCGAAATGGAAAGGAAGGCTTCCAAAGAATTCTGTTTCCTCTGCCAAGAATCAAATGTAAACCTCGAGGATTCTTCCTCTGAAGACGATGATGACAGTAACCAAACTTCCATTTCTTTGGCTTCTAGTAAGAATATGAAATACAGTCTTGTTGCAAGCAAGCAAATGGTGGGAATTTTCGCATGTGTCTGGATGAAGAAGGAACTTGTTCAGCATGTTGGTCATTTGAGAGTATGTTGCACTAGTCGTGGGATCATGGGTTGCCTTGGAAACAAGGGTTGTATATCTGTGAGCATGTCATTGTACCAGACAACTTTTTGCTTTATCTGCAGTCATTTGGCATCCGGAGAGAAAGAGGGTGATGAGCTTCGGAGAAACCTTGATGTTATAGAGATTTTAAAGAACACTCAGTTTCCGAGGATTTGCAAGACCTCATATAGTAGAATGCCCGAGAGAATTTTAGACCATGATCGGATCATATGGCTAGGGGACTTAAACTACCGAATTGCTTTAAGCTATGATGATGCAAAAAGGCTTGTGGAAAGGAAGGATTGGCTTGCACTCTTTGACAAGGACCAGCTTCAGGCAGAAAGGGAAGCGGGTCGCGTATTTAAGGGATGGAGAGAAGGGAAAATCTACTTTGCACCTACTTATAAATACCCCTTCAACTCAGATACTTACTATGCAGAATCTGTCAAAGTTTCAAAAAGCAAAAGAAGAACTCCGGCTTGGTGCGATAGAATTTTATGGCGCGGAAAGGGAATTCAGCAACGCACGTACGAGCGAAAGGAATTGAAGTTTTCCGATCATCGGCCGGTTTGTGCGACATTTTTGGTACAAGTTGAGGCCACGTCAAGGAGGCTCAAGAAGGTTCCTTCTTTCAATTTTCAGATCGAAGATCTTGTAACCACAACAAGAAGGGCATATTGTTCTTAA 1521 0.4149 MEYDGEYGSEVSDIISTNQQRRKQSFIRKIFTVKERNGREAGGISVDTLEALSDPSFKNHYFSCTELPMSSGEEIQNLRVFVATWNVGGQCPNGNLDLSDFLQVRNEPDIYVLGFQEIVPLNAGNVLVLEDNEPAAKWLALINHSLNGTSRLASKGLKHTASFGGSLFFQKPTYRKLKKTLRTLDGKRLKGCNCVLEMERKASKEFCFLCQESNVNLEDSSSEDDDDSNQTSISLASSKNMKYSLVASKQMVGIFACVWMKKELVQHVGHLRVCCTSRGIMGCLGNKGCISVSMSLYQTTFCFICSHLASGEKEGDELRRNLDVIEILKNTQFPRICKTSYSRMPERILDHDRIIWLGDLNYRIALSYDDAKRLVERKDWLALFDKDQLQAEREAGRVFKGWREGKIYFAPTYKYPFNSDTYYAESVKVSKSKRRTPAWCDRILWRGKGIQQRTYERKELKFSDHRPVCATFLVQVEATSRRLKKVPSFNFQIEDLVTTTRRAYCS 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01714 506 SUPERFAMILY DNase I-like 66 477 IPR036691 -
Accr13g01714 506 SMART i5p_5 76 480 IPR000300 GO:0016791|GO:0046856
Accr13g01714 506 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 69 488 IPR045849 GO:0004445
Accr13g01714 506 Pfam Endonuclease/Exonuclease/phosphatase family 83 465 IPR005135 GO:0003824
Accr13g01714 506 Gene3D Endonuclease/exonuclease/phosphatase 68 494 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01714 Accr-Chr13 32716486 32721424 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01714 243 485 Acyl Lipid Metabolism Gene Families AT2G43900 29.371 2.17e-32 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01714 - - tpra:123894517 737.258