Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01692 ATGGCTTCCCTCTTCCCCTGTCCCACTCTCTCTTCTAAAATTGACTTCGTGGTTTCTCCATCATCAGAAGCACGGAGTCATTATCGTAAATTTAATGGCAGTAGTTCTTTGGCCGCTCAAAATTTCGGCACCTGCAGACTCTGTGCTTTCGGAAATTCTACTTCTCCAAGCTTTGTTCCTATGGCTTCCGCCAGAAGAGAGCCCATGGTTCCCCCTTACCGCGTTTTGATAACTGGTTCAAGCAAAGGAATAGGTTATGCATTGGCAAAAGAGTTTCTAAGAGCTGGTGACTATGTCATAATTTGCTCAAGATCAAATGAAAAGGTAGAATCAGCTGTTCAGAACTTGAGAGAAGAATTTGGGGAGCAGTATGTGTGGGGCACTAAGTGTGATGTGAGAGAGGCAGAGGATGTGAAGAATTTAGTGGCATTTGCCCAAGAAAAACTGAAATACATTGATATATGGATAAATAATGCAGGATCAAATGCATATAGCTACAAGCCTCTTGCGGAGGCGTCTGATGAAGATCTTATTGAGGTAGTTGCAACAAATACACTTGGTTTGATGATATGTTGTCGAGAGGCAATAAAGATGATGGCAAATCAGCCACGTGGAGGTCATATTTTCAATATTGATGGGGCAGGTTCGGATGGAAGACCAACTCCCAGGTTTGCTGCCTATGGAGCTACAAAGCGGAGTGTGGTGCATCTAACAAAATCATTACAGGCAGAACTACAGATGCAGGATGTTAAAAATGTGATGGTGCATAATCTTTCGCCTGGGATGGTGACCACTGATCTTCTCATGTCTGGTGCTACAACTAAACAGGCGAAGTTTTTCATTAATGTATTGGCTGAACCAGCTGAAGTGGTTGCTGAATCTCTGGTTCCAAACATTAGATCTACCATTGCCAATGGATCAATGAAGCCAACCTATATTAAATTCCTCACTGGGGTTAAAGCGTATTCTCAGATATTTTCACGATTTGCATTTGGGGCAAGAAGGAACCGATACATCCTTGAAGATTGA 1029 0.4266 MASLFPCPTLSSKIDFVVSPSSEARSHYRKFNGSSSLAAQNFGTCRLCAFGNSTSPSFVPMASARREPMVPPYRVLITGSSKGIGYALAKEFLRAGDYVIICSRSNEKVESAVQNLREEFGEQYVWGTKCDVREAEDVKNLVAFAQEKLKYIDIWINNAGSNAYSYKPLAEASDEDLIEVVATNTLGLMICCREAIKMMANQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMQDVKNVMVHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPAEVVAESLVPNIRSTIANGSMKPTYIKFLTGVKAYSQIFSRFAFGARRNRYILED 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01692 342 FunFam Chlorophyll(Ide) b reductase NOL, chloroplastic 70 315 - -
Accr13g01692 342 CDD SDR_c 75 296 - -
Accr13g01692 342 Pfam short chain dehydrogenase 75 270 IPR002347 -
Accr13g01692 342 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 214 242 IPR020904 GO:0016491
Accr13g01692 342 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 74 291 IPR036291 -
Accr13g01692 342 PRINTS Glucose/ribitol dehydrogenase family signature 74 91 IPR002347 -
Accr13g01692 342 PRINTS Glucose/ribitol dehydrogenase family signature 150 161 IPR002347 -
Accr13g01692 342 PRINTS Glucose/ribitol dehydrogenase family signature 200 216 IPR002347 -
Accr13g01692 342 PRINTS Glucose/ribitol dehydrogenase family signature 251 268 IPR002347 -
Accr13g01692 342 PRINTS Glucose/ribitol dehydrogenase family signature 227 246 IPR002347 -
Accr13g01692 342 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 206 214 IPR002347 -
Accr13g01692 342 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 161 IPR002347 -
Accr13g01692 342 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 227 246 IPR002347 -
Accr13g01692 342 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN-RELATED 61 339 - -
Accr13g01692 342 Gene3D - 73 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01692 Accr-Chr13 32074174 32083650 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01692 75 267 Acyl Lipid Metabolism Gene Families AT1G24360 31.313 1.56e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01692 K13606 - gmx:100797874 515.383