Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01651 ATGGAGGGCAAGTTAGGATTAGTTGCAGGCTCTCGCAACTGCAACGAGTTCATCATCTTCAACCCAGATGCCAATTTTTCTAGAAGAGAAGAGAAAGAAGAAAGAGGGAAAGAATGCAAAATATGTGGGGATGAGATAGGAATAAACGAAGAGGGAGAGGTGTTTGTGGCGTGCAATGAGTGCGCCTTCCCTGCTTGTAGGAACTGTTATGAGTATGAGAGACGAGAAGGCAGCCATGTCTGTCCTCAGTGCAAAACCAGATATAAACGTCTCAAGGGGAGCGCTAGAGTTGATGGAGATGAGGAGGAGGATGACATTGATGACTTGGAGAATGAGTTTGATTTCAATGAGGAAACAAGACAACAGGATATGCAGCTCCACGGTTATTCCCAGGATGAAGATGATGAAAGGGTGGGAGAAGGGCATAACAATAATAAAGCAATAGAGCCATCGAGCATGGGCAATAAGGTAATTTCAATACATGCAAGACCTATGGATCCTTCGAAGGACTTGGCTGCCTATGGCTATGGAAGTGTTGCTTGGAAGGAAAGAATGGAGAGTTGGAGGGAACGACAAGAAAAAATGCGTCTCATGCGAATTGACAATAATACCACTTATGAAGAATACCAAGATAGTTTTGCAGATGACGATGGCATAAATTTTCCTCTAATGGACGAGGGAAGACAAGCATTGTCAAGAAAGATGGCAATATCGTCAAGCAAAATAAATCCTTACAGAATAATGATAATAATTCGAATGGTGATTCTTGGATTCTTCTTCCATTATAGAGTGACGCATCCTGTGGACAATGCTTTTGCTCTCTGGCTTGTTGCTGTTGTCTGTGAGCTTTGGTTTTCTCTTTCATGGATTCTTGATCAGTTTCCTAAGTGGTTCCCTGTTCAAAGAGAAACCTATCTTGATAGGCTCTCCTTAAGGCATGAGAAAGATGGGGAGGCTTCACAACTCTGTGGAATTGATATATTTGTGACAACATTGGACCCATTGAAGGAACCTCCATTGGTGACTGCAAACACAATTCTTTCTATCCTTGCGGTGGATTACCCACCTGAGAAGGTCTCATGCTTTGTCTCCGATGACGCCGCCGCCATGTTAACATTTGAAACCTTATCTGAAACTTCTGATTTTGCAAAGAAATGGGTCCCATTTTGTAAGAAATTCAATATTGAGCCTCGTGCTCCTGAGTGGTATTTTGCTGAGAAGGTAAATTACTTGAAAGATAAGGCACACCCTTCGTTTGTTAAAGAGAGAAGAGCTATGAAGAGAGAGTACGAAGAGTTTAGAGTTCGAATTAATTCTTTGGTTGCAAAGGCTAGAAAGGTTCCCGAAGAAGGATGGACAATGCAGGATGGAACAATATGGCCTGGAAATAATGTCGATGACCACCCTGGGATGATCCAGGTTTTTCTTGGACAATATGGAGGACATGACACGGATGGAAATGAATTGCCACGCTTGACATATGTTTCTAGGGAAAAGAGATCTAAATTCAAACACTATATGAAAACAGGAGCGTTGAATGCATTGGTTAGAGTTTCAGCTGTGCTTTCAAATGCTCCTTATTTGCTGAACTTGGACTATGATCATTACATCAACAATAGCAAAGCTATCAGAGAAGCAATGTGCTTCATGATGGACCCATTACAAGAGAAAAGGGTATGCTATGTTCAGTTCTCTCACAGATTTGGCGGAGCTGATGATAATGACAAATATAACAGTCCAAGTACAGCATACCTTGATATTAACATGAAAGGCATGGATGGGATTCAAGGACCTATATATGTTGGGACAGGATGTGTATTTAAAAGGCATACACTATATGGTTATGATGCTCCTAGAAAAAAGAAGACACCAACTAAGACTTGCAATTGTTGGCCAAAGTGGTGTTGTTGTTTGTGTTTTCGCTTAAGAAACAAGAAGAAAAAGTCGAAGAATTCGAGGTTTGACTTTGAAGATAGCAGTAACATAAAAGTGCATGATGCAGAGATATCAATGAAAGACTATGCTTTGACCCGTATTGAGCAGGAAACCAAAGGAGTTGAAGGGCAAGTTTTGGGAGAAAAATATAAGCCAAAGTTGTGGAAGAAATTTGGACAATCTCCTGTACTTATTGCATCTACTATTCTAGAGAATGGTGAGACAGTAAAAGATGCCAGCCTTGCTTCTCTACTTAAAGAAGCCATCCATGTCATTAGCTGTAGCTATGAGGAGAAGACCGAATGGGGAAAAGAGGTTGGATGGATCTATGGTTCAACCACAGAGGATATACTAACAGGGTTTAAAATGCATTGCCATGGATGGAGATCAATATATTGTATCCCAGAACGGCCCGCATTCAAAGTTTCTGTGCCAAGGAACCTTTCAGATGGTCTGGTTCAAGTGTTTAAGTGGGCATTAGGATCCACAGAGATATTCTTGAGCAAACATTGTCCTATTTGGTATGGCTATAGAGGAGGATTGAAGTGGCTAGAACGTATTTCTTACATAAATGCTACTATTTATCCATGGACATCTATTCCTCTTGTTGCTTATTGCAGTCTTCCTACAGTTTGCCTACTCACAGGCAAATTTATTGTTCCTCAGCTCAATAACTTTGATGGCATGTGGTTTCTCTCACTATTCATATGCATATTTTCCACAAGCATACTAGAGATGAGATGGAGTGGAGTGCCAATTGATGAGTGGTGGAGAAATGAGCAACTTTGGGTGATTGAAGGAGTATCAGCAAATTTATTTGCACTATTTTTAGGACTGTTCAAGGTGATAACTGGTATAGACACAAAGTTCATTGTGAAATCAAAAGCAAGTGATGAAGAAGAAGGCAAGGACTTCGCTGGCATATTTGCTCTGAACTGGACTACTTTGCTCATTATACCAACCACTTTGTTAATTTTGAACCTCATTGCCATAGTTGCTGGTGTGTCGCATGCAATTAATGATGGTTTTGAATCTTGGGGTCCTTTTCTGGGGAAACTATTATTTGCCTCTTGGGTGATTTGTCATTTATACCCTTTCCTTAAGGGTATGATGGGTAGGAAAAATAGGACTCCCACCATTGTTCTTGTTTGGTCTATTTTGCTTGCTTCTTTCTTTTCAGTTTTGTGGGTCAAGATTGACCCTTTCTTACCCAAATCCAGTGGCCCAATTTTGGAGGAGTGTGGATTGGACTGTGATTAG 3195 0.4078 MEGKLGLVAGSRNCNEFIIFNPDANFSRREEKEERGKECKICGDEIGINEEGEVFVACNECAFPACRNCYEYERREGSHVCPQCKTRYKRLKGSARVDGDEEEDDIDDLENEFDFNEETRQQDMQLHGYSQDEDDERVGEGHNNNKAIEPSSMGNKVISIHARPMDPSKDLAAYGYGSVAWKERMESWRERQEKMRLMRIDNNTTYEEYQDSFADDDGINFPLMDEGRQALSRKMAISSSKINPYRIMIIIRMVILGFFFHYRVTHPVDNAFALWLVAVVCELWFSLSWILDQFPKWFPVQRETYLDRLSLRHEKDGEASQLCGIDIFVTTLDPLKEPPLVTANTILSILAVDYPPEKVSCFVSDDAAAMLTFETLSETSDFAKKWVPFCKKFNIEPRAPEWYFAEKVNYLKDKAHPSFVKERRAMKREYEEFRVRINSLVAKARKVPEEGWTMQDGTIWPGNNVDDHPGMIQVFLGQYGGHDTDGNELPRLTYVSREKRSKFKHYMKTGALNALVRVSAVLSNAPYLLNLDYDHYINNSKAIREAMCFMMDPLQEKRVCYVQFSHRFGGADDNDKYNSPSTAYLDINMKGMDGIQGPIYVGTGCVFKRHTLYGYDAPRKKKTPTKTCNCWPKWCCCLCFRLRNKKKKSKNSRFDFEDSSNIKVHDAEISMKDYALTRIEQETKGVEGQVLGEKYKPKLWKKFGQSPVLIASTILENGETVKDASLASLLKEAIHVISCSYEEKTEWGKEVGWIYGSTTEDILTGFKMHCHGWRSIYCIPERPAFKVSVPRNLSDGLVQVFKWALGSTEIFLSKHCPIWYGYRGGLKWLERISYINATIYPWTSIPLVAYCSLPTVCLLTGKFIVPQLNNFDGMWFLSLFICIFSTSILEMRWSGVPIDEWWRNEQLWVIEGVSANLFALFLGLFKVITGIDTKFIVKSKASDEEEGKDFAGIFALNWTTLLIIPTTLLILNLIAIVAGVSHAINDGFESWGPFLGKLLFASWVICHLYPFLKGMMGRKNRTPTIVLVWSILLASFFSVLWVKIDPFLPKSSGPILEECGLDCD 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01651 1064 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 112 IPR013083 -
Accr13g01651 1064 Pfam Zinc-binding RING-finger 32 105 IPR027934 -
Accr13g01651 1064 Pfam Cellulose synthase 325 1055 IPR005150 GO:0016020|GO:0016760|GO:0030244
Accr13g01651 1064 Coils Coil 92 119 - -
Accr13g01651 1064 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 479 623 IPR029044 -
Accr13g01651 1064 Coils Coil 423 443 - -
Accr13g01651 1064 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 229 1030 - -
Accr13g01651 1064 MobiDBLite consensus disorder prediction 131 150 - -
Accr13g01651 1064 CDD mRING-HC-C4C4_CesA 41 87 - -
Accr13g01651 1064 SUPERFAMILY RING/U-box 29 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01651 Accr-Chr13 31158924 31169054 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01651 7 1063 Glycosyltransferase AT5G64740 60.675 0.0 1368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01651 K10999 - gmx:100815971 1502.26