LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr13g01645	ATGGCGGAAGAGCCCAAGAAAGCAGCTGAGGAAGTGGCGGCGGTAGAGGCAGTTGCCGAGAAATCTGTTGTTGAAGAAAAAGAAGAGACTGAGAAGCCGGTCATCGAAGCAGAGCCTGAGAAGGAGAAGCCAATCGCTGAGAGCGAGAAAAAAGATGAAGAGAAGCCAGCGGGGCCCACTGAGGAAGTTGTCGAGGATGAAAAACCTAAGGCACCAACAGAAGGAAGCAAGATTGCTCAGTCTGTTTCTTTCAAGGAGGAGACCTATGTAGTCGCCGACCTCCCTGAATCTCAGAAGAAGGCCCTTGATGAGCTGAAACATCTTGTTCAAGAAGCACGGAACAAGCACGAGTTCACTGCTCCTCCTCCGGTGGCGGCTAAGGAGGAGCCGGTGGCGGCTAAGGAGGAGGAAGAGAAGAAGGCCCCGGAGGTGGTGACAACTGAGGAGAAGAAGGAGGAGGAGAAGGAGGAAGAAAAACCTGCGGCAGCTGAGGAAAAAACTGAAGCAGAGCCTCCTAAGGAGGTTGTTGTTGCAGAGCCAGCTAAGGTTGAGGCTGAAGCTGTTACTGAAGAGAAAAAGGAGGAGGAGAAACTCGCACCCGAAGCTCCGGTCGCCGAAGAGAAAAAAGAGGAGGAGAAAAAGGAGGTGGTTGAACCTGTCACTGAAGAGAAAAAGGATGAGGAGAAGCCTACCCCTGAAGCTGCTGTTGCCACAGAGGTGGCTGAGAAAGTTTTTACTGAAGTACAGGATGATTCTAAGGAAGTGGAAACAATCAAAGATACCGTAGTTTCAGTCTCTGAGGAGGCAGCACCTGCAGCTAAGGATGGTGAGGCCACTGCTCCGGTGCCAGAAACGGCGGCACCAGAAAAGAACGTGGAGGAGGAGGTGCCTGCGCCTCCTCCGCCTCCACCGGAGGAGGTTTCAATCTGGGGAATTCCCCTGCTTGCGGATGAGAGGAGTGATGTTATACTCCTGAAATTCTTGAGGGCTAGAGATTTCAAGGTGAAGGACGCCTTCACGATGATCAAGAACACCGTTCGTTGGCGAAAGGAATTTGGAATCGACGCACTTGTTGAGGAAGATCTTGGGAACGATTGGGACAAGGTGGTGTTCACTCATGGGTATGACAAAGAAGGCCATCCAGTTTGCTACAACGTGTTTGGTGAGTTTGAGAACAAGGAGTTGTATCAGAACACGTTTTCTGATGAGGAGAAGCGCCAGAAGTTCATCAGATGGAGGATTCAGTTCTTGGAGAAGAGCGTTAGAAAATTTGACTATTCTCCTACTGGTATTTCTACAATTGTCCAGGTCAATGATCTTAGGAATTCACCTGGATTGGGTAAGAAGGAACACAGGCTAGCAACCAATCAGGCCCTCCAATTGCTTCAGGATAACTATCCCGAGTTCTTAGCCAAGCAGGTGTTTATCAATGTTCCATGGTGGTACCTGGCCTTTTCAAGGATGATCGGTCCATTCCTGACTCAGAGGACCAAAAGCAAATTTGTATTTGCTGGTCCATCCAAATCTGCTGAAACACTTTTCAAATACATAGCTCCTGAGCATGTGCCTGTCCAGTATGGTGGATTGAGCAGGGAAGGTGACTATGAATTCACAACTGCTGACTCTGTTACCGAGTTTACCATTAAACCATCAACAAAACATATTATTGAATTCCCTGCTTCTGAGCCGAGCCATCTGGTTTGGGAACTGAGAATTGTGGGTTGGGAAGTGAGCTATGGGGCTGAATTCGTGCCGAGTGCTGAAGATAGATACACTGTGATAGTACAGAAGAGCCGGAAAATTGGGGTTTCAGATGAAACCATAATCTCTAATGATTTCAAAATTGGGGAACCTGGCAAGGTTGTGCTCACCATTGATAATCAGACATCAAAGAAGAAGAAATTGCTGTACAGGTCCAAGACCAAACCCATCTCTGAGTGA	1941	0.4843	MAEEPKKAAEEVAAVEAVAEKSVVEEKEETEKPVIEAEPEKEKPIAESEKKDEEKPAGPTEEVVEDEKPKAPTEGSKIAQSVSFKEETYVVADLPESQKKALDELKHLVQEARNKHEFTAPPPVAAKEEPVAAKEEEEKKAPEVVTTEEKKEEEKEEEKPAAAEEKTEAEPPKEVVVAEPAKVEAEAVTEEKKEEEKLAPEAPVAEEKKEEEKKEVVEPVTEEKKDEEKPTPEAAVATEVAEKVFTEVQDDSKEVETIKDTVVSVSEEAAPAAKDGEATAPVPETAAPEKNVEEEVPAPPPPPPEEVSIWGIPLLADERSDVILLKFLRARDFKVKDAFTMIKNTVRWRKEFGIDALVEEDLGNDWDKVVFTHGYDKEGHPVCYNVFGEFENKELYQNTFSDEEKRQKFIRWRIQFLEKSVRKFDYSPTGISTIVQVNDLRNSPGLGKKEHRLATNQALQLLQDNYPEFLAKQVFINVPWWYLAFSRMIGPFLTQRTKSKFVFAGPSKSAETLFKYIAPEHVPVQYGGLSREGDYEFTTADSVTEFTIKPSTKHIIEFPASEPSHLVWELRIVGWEVSYGAEFVPSAEDRYTVIVQKSRKIGVSDETIISNDFKIGEPGKVVLTIDNQTSKKKKLLYRSKTKPISE	646

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr13g01645	646	CDD	SEC14	364	529	IPR001251	-
	Accr13g01645	646	SUPERFAMILY	Supernatant protein factor (SPF), C-terminal domain	542	638	IPR036598	-
	Accr13g01645	646	MobiDBLite	consensus disorder prediction	129	233	-	-
	Accr13g01645	646	Gene3D	-	368	545	IPR036865	-
	Accr13g01645	646	Gene3D	-	301	351	-	-
	Accr13g01645	646	SMART	sec14_4	363	531	IPR001251	-
	Accr13g01645	646	Pfam	CRAL/TRIO domain	368	528	IPR001251	-
	Accr13g01645	646	SMART	CRAL_TRIO_N_2	320	345	IPR011074	-
	Accr13g01645	646	MobiDBLite	consensus disorder prediction	1	73	-	-
	Accr13g01645	646	Gene3D	GOLD domain	546	641	-	-
	Accr13g01645	646	Pfam	CRAL/TRIO, N-terminal domain	305	344	IPR011074	-
	Accr13g01645	646	MobiDBLite	consensus disorder prediction	1	85	-	-
	Accr13g01645	646	ProSiteProfiles	CRAL-TRIO lipid binding domain profile.	359	534	IPR001251	-
	Accr13g01645	646	ProSiteProfiles	GOLD domain profile.	536	641	IPR009038	-
	Accr13g01645	646	PANTHER	PATELLIN-1	152	643	IPR044834	GO:0008289
	Accr13g01645	646	SUPERFAMILY	CRAL/TRIO N-terminal domain	92	361	IPR036273	-
	Accr13g01645	646	SUPERFAMILY	CRAL/TRIO domain	369	530	IPR036865	-
	Accr13g01645	646	MobiDBLite	consensus disorder prediction	114	238	-	-
	Accr13g01645	646	MobiDBLite	consensus disorder prediction	267	303	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr13g01645	Accr-Chr13	30983316	30986439	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr13g01645	324	508	Acyl Lipid Metabolism Gene Families	AT5G47730	27.861	1.99e-08	54.7

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr13g01645	-		K19996	qsa:O6P43_029975	619.772