Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01620 ATGGTGAAATCCGAGGATCTCAATAGTGGGGTTGATGAAACTTTCCCTGACTTGCTAAAAAACACGCCTTCTAATATTGCAAGATTGGAGGATGTGATCGAGCATTCAAAAGCAAGGCAGAAGTATCATGCGCAAACGGGGAGTCCATCTGATGGGGGCGATGTTAGGTGGTACTTTTGTAAGATCCCATTGGCGAATAATGTTTTGTCTGCTGCAGTCCCTCCCACAGAACTAGTGGGAAAGAGTGATTATTTTCGTTTTGGTATGAGAGATTCTTTGGCAATTGAAGCATCTTTTTTGCAGGGAGAGGAAGAATTTCTTTCATGCTGGTGGAGGGAATATGCAGAATGCAGTATTGGTCCAAGAGAAAGACAAATTTCTGATAGCAAAATGGATAAGGGGAGTGCTTGGTCATCCGAACTATATGAGATTGAGGAAGAGAGAGTTGGTGTTCCTGTAAAAGGAGGACTTTATGAGGTAGATTTAGCAAAGCGACATTGTTTTCCTGTTTATTGGAATGGAGAAAATCGACGTGTTCTAAGAGGCCACTGGTTTGCACGTAAGGGGGGATTGGATTGGCTTCCACTTCGGGAAGATGTTGCTGAACAACTAGAGGTTGCATATCGTAGGCAGGTTTGGCATCGCAGGACATTTCAGCCATCAGGACTTTTTGCAGCTCGTGTTGACTTGCAAGGATCAACCACTGGCCTGCATGCTCTTTTCACTGGAGAGGATGATACCTGGGAGGCCTGGCTAAATGCTGATTCTTCTGGATTTTCTAATATTGCTAGTTTAGCTGGTAATGGGATCAAGCTAAGACGTGGTTATTCCCCATCAAACTCACCAAAACCAACCCAGGATGAGTTACGTCAGCGGAAGGAGGAGGAGATGGATGATTACTGTTCACAGGTCCCTGTTCAACACTTGGTATTTATGGTTCATGGAATTGGGCAAAGGTTGGAAAAATCTAATTTGGTTGATGATGTGGCCAATTTTCGGCATATTACAGAAAGTCTGGCAGAGCAGCACCTCACTGCACACCAGCTTGGCACTCAAAGGGTTCTTTTTATCCCATGTCAGTGGAGAAAAGGATTGAAGCTTAGTGGTGAAAGTGCTGTGGAGAAAATAACCTTGGATGGAGTCCGGGGCCTGCGAGTCATGCTAAGTGCTACAGCTCACGATGTGTTATATTATATGAGCCCAATCTACTGTCAAAACATAATTGACTCGGTATCAACCCAACTAAATCGGCTGTATTTGAAGTTTCTCAAACGCAATCCGGGATATGAGGGAAAGGTCTCAATATATGGTCATTCTTTGGGAAGTGTGCTGTCCTATGATATTCTTTGCCATCAAGAAAATCTGTCCTCTCCATGTCCAATGGATTCAGTGCATAGGGAATATTATAAGCATGAAAATCCATCTCTCGCTGTGAAGGACTATTGTTCTGGGAGCTATTCATCAAGTCTTAAGAATGATGCATTGAGCGAACCGGAGCATGAGAGAGATGTTCATGATTTCCTTTCTGATTTGAGTAATGCACCTAATGAGAAAACCGATGCATTATCTAAGCTTGAGAATATGAATGCCGGGCTCCCTGCTGATGGTTTAGAGAGATTGACCAAGAATGAACACGAGAATATGAGCAACAGGGACGAAGTAATCAGAATGCTCAGGGAAGAGGTTGATTCATTGAAAGCCAAGCTTAAGGAACTTGAATCACATGGTGGCAGCCAGCATTCAAAAGAAGGCCTAGGCTCTGAAGATGCACCAGAGAGTTACTCCCCTTATATCAAATATACAAAGCTCCAATTCAAGGTTGATACATTCTTTGCTGTTGGTTCCCCTCTTGGAGTGTTTCTTGCCCTTCGTAATCTCCGAATTGGCATTGGAAGAGGCCAACAATATTGGGAGGAGGAAAATATAATTGAACAGATGCCAGCTTGTCGCCAGATGTTCAACATCTTTCACCCCTATGATCCAGTGGCTTATAGGGTAGAGCCACTTGTATGTAAAGAATATATCAACAAACGACCTGTTTTAGTACCCTATCATAGAGGAGGAAAGAGGTTGCATATTGGATTCCAGGAATTTAGTGAAGACTTGGCAGTTCGCACACAGGCAGTACTTGATCATCTCAAATCTGCAAGGGTGAAGATCCTGTCAGTTTGTCAGTCAAAGAAAACAGAGAGCATAGAAGGAGATAATTCAGAAGAAGAGGAAGAAACATATGGATCTATTATGATGGAGAGGTTAACAGGAAGCAAAGAAGGACATATCGATCACATGCTTCAGGATAAAACCTTTGAGCATCCATATCTGCAGGCCATCGGATCACATACGAACTATTGGAGAGATCCTGATACTGCTCTTTTTATCTTGAAACACTTGTATCGAGATATACCCGAAGAGCCTAACTCATCTGTGAAACCTAGTGATGGCAAAAAGAATGAGATTGGTTCTGCTGATCGGATTGATCCAAGAGAGAATGTTGAGGAAGAACTTCCTTTGACGTTCGCCGACAATACTATGGTCGGAAACTTCTCAAGAAAAGCCAAAAAGTCCATGAAATAG 2574 0.4293 MVKSEDLNSGVDETFPDLLKNTPSNIARLEDVIEHSKARQKYHAQTGSPSDGGDVRWYFCKIPLANNVLSAAVPPTELVGKSDYFRFGMRDSLAIEASFLQGEEEFLSCWWREYAECSIGPRERQISDSKMDKGSAWSSELYEIEEERVGVPVKGGLYEVDLAKRHCFPVYWNGENRRVLRGHWFARKGGLDWLPLREDVAEQLEVAYRRQVWHRRTFQPSGLFAARVDLQGSTTGLHALFTGEDDTWEAWLNADSSGFSNIASLAGNGIKLRRGYSPSNSPKPTQDELRQRKEEEMDDYCSQVPVQHLVFMVHGIGQRLEKSNLVDDVANFRHITESLAEQHLTAHQLGTQRVLFIPCQWRKGLKLSGESAVEKITLDGVRGLRVMLSATAHDVLYYMSPIYCQNIIDSVSTQLNRLYLKFLKRNPGYEGKVSIYGHSLGSVLSYDILCHQENLSSPCPMDSVHREYYKHENPSLAVKDYCSGSYSSSLKNDALSEPEHERDVHDFLSDLSNAPNEKTDALSKLENMNAGLPADGLERLTKNEHENMSNRDEVIRMLREEVDSLKAKLKELESHGGSQHSKEGLGSEDAPESYSPYIKYTKLQFKVDTFFAVGSPLGVFLALRNLRIGIGRGQQYWEEENIIEQMPACRQMFNIFHPYDPVAYRVEPLVCKEYINKRPVLVPYHRGGKRLHIGFQEFSEDLAVRTQAVLDHLKSARVKILSVCQSKKTESIEGDNSEEEEETYGSIMMERLTGSKEGHIDHMLQDKTFEHPYLQAIGSHTNYWRDPDTALFILKHLYRDIPEEPNSSVKPSDGKKNEIGSADRIDPRENVEEELPLTFADNTMVGNFSRKAKKSMK 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01620 857 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 33 809 - -
Accr13g01620 857 MobiDBLite consensus disorder prediction 538 552 - -
Accr13g01620 857 MobiDBLite consensus disorder prediction 572 591 - -
Accr13g01620 857 Pfam DDHD domain 742 798 IPR004177 GO:0046872
Accr13g01620 857 Pfam DDHD domain 603 738 IPR004177 GO:0046872
Accr13g01620 857 SUPERFAMILY alpha/beta-Hydrolases 400 471 IPR029058 -
Accr13g01620 857 MobiDBLite consensus disorder prediction 273 294 - -
Accr13g01620 857 ProSiteProfiles DDHD domain profile. 603 799 IPR004177 GO:0046872
Accr13g01620 857 MobiDBLite consensus disorder prediction 533 552 - -
Accr13g01620 857 MobiDBLite consensus disorder prediction 803 837 - -
Accr13g01620 857 Coils Coil 555 575 - -
Accr13g01620 857 MobiDBLite consensus disorder prediction 816 835 - -
Accr13g01620 857 SMART DDHD_2a 603 799 IPR004177 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01620 Accr-Chr13 29624674 29670379 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01620 11 857 Acyl Lipid Metabolism Gene Families AT1G31480 62.338 0.0 1142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01620 - - aprc:113864311 1271.91