Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01395 ATGGGTCAAGCTTTTCGAAAGCTCTTTGATACTTTCTTCGGGAACTCCGAGATGCGGGTTGTGATGCTTGGTCTTGATGCTGCCGGCAAAACAACTATACTGTACAAGCTGCATATTGGAGAAGTTTTATCTACTGTCCCTACTATTGGTTTCAATGTGGAGAAAGTTCAGTATAAGAATGTTATGTTCACAGTTTGGGATGTAGGAGGGCAAGAAAAATTAAGGCCACTTTGGAGGCACTATTTTAATAACACAGATGGTTTGATATATGTTGTTGATAGTTTGGACCGAGAGAGAATTGGAAAGGCAAAGCAGGAATTTCAGGCTATCATAAATGATCCTTTCATGCTCAATAGTGTCATCTTGGTTTTTGCCAACAAACAAGACATGAAAGGAGCAATGACGCCGATGGAAGTATGTGAAGGACTAGGTCTCTTTGAACTCAAGAATAGAAAATGGCACATACAAGGAACTTGTGCACTAAAGGGAGATGGCCTTTATGAGGGCTTGGACTGGTTGGCTGCAACTCTGAAGGAGAGAAATGCTGCTGGATACTCTTCACTAGGAACCTCATCTTTCTAA 582 0.4141 MGQAFRKLFDTFFGNSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVMFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIINDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFELKNRKWHIQGTCALKGDGLYEGLDWLAATLKERNAAGYSSLGTSSF 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01395 193 CDD Arf1_5_like 18 176 IPR045872 GO:0003924
Accr13g01395 193 Pfam ADP-ribosylation factor family 6 176 IPR006689 GO:0003924|GO:0005525
Accr13g01395 193 Gene3D - 3 186 IPR027417 -
Accr13g01395 193 ProSiteProfiles small GTPase Arf family profile. 11 177 - -
Accr13g01395 193 SMART sar_sub_1 9 177 IPR006689 GO:0003924|GO:0005525
Accr13g01395 193 SMART arf_sub_2 1 181 - -
Accr13g01395 193 FunFam ADP-ribosylation factor 2 4 186 - -
Accr13g01395 193 NCBIfam small GTP-binding protein domain 16 136 IPR005225 GO:0005525
Accr13g01395 193 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 181 IPR027417 -
Accr13g01395 193 PRINTS GTP-binding SAR1 protein signature 74 99 IPR006689 GO:0003924|GO:0005525
Accr13g01395 193 PRINTS GTP-binding SAR1 protein signature 119 140 IPR006689 GO:0003924|GO:0005525
Accr13g01395 193 PRINTS GTP-binding SAR1 protein signature 19 42 IPR006689 GO:0003924|GO:0005525
Accr13g01395 193 PRINTS GTP-binding SAR1 protein signature 47 71 IPR006689 GO:0003924|GO:0005525
Accr13g01395 193 PANTHER ADP RIBOSYLATION FACTOR-RELATED 8 176 IPR024156 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01395 Accr-Chr13 21101152 21104917 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01395 K07937 - gmx:100791271 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g01395 13 21101152 21104917 Accr13g01395 13 21101152 21104917 ECH