Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01359 ATGAGTGACAATTTGATGGATAAAGTCAGCGCCTTGGGGGAGCGCCTGAAAATTGGTGGGTCTGAGATGGGTCGAAAGATGAGTGAAGGCATGAGTTCTATGAGCTTAAAGATGAGGGAACTTTTTCAGGCTGCAAGCGAGACTGATAAGGTTGTTGATGATGCCACCTCTGAGACACTTGATGAGCCTGATTGGGCCATGAATCTTGAGCTTTGCGATTCGATAAATAATGATCAGGTCAACAGTGTAGAAGTGATTCGTTCAATCAAGAAACGGATTATGGTTAAGAGTCCAAAGGTTCAGTACCTGGCCATGGTTTTGCTTGAAACATGCGTTAAAAATTGTGAAAGGGCCTTCACAGAAGTGGCAGCTGAGAGAGTCCTTGATGAGATGGTCAAGCTGATTGATGACCCTCAGACTGTTGTGAATAACAGGAACAAGGCCTTAACACTCATTGAGGCATGGGGGGAGTCAACCAGTGAGCTTCGCTATTTGCCTGTATATGAAGAAACGTACAAGAGTTTGAAGTCAAGAGGTATTCGATTCCCTGGTCGTGACAATGAAAGTCTGGCACCTATTTTTACTCCTCCTCATTCAGTGACTGCTTCAGAAGTTCATGTTGATCAGTCAGGACAGGTTCAGCAAGATCTTCCTGTGCGGACTTTCACACCTGAGCAAACAAAGGAGGCTTTCAATGTTGCAAGAAATAGCATTGAGCTTCTTTCTACTGTTCTGTCTTCATCACCTCAGCAGGATGTTCTCCAGGATGATTTGACTGCAACCCTTGTACAACAGTGTCATCAGTCTCAATTTACCGTACAGAGAATCGTTGAGACTGCTGGAGATGATGAGGCACTCCTTTTTGAGGCCTTGAATGTTAATGATGAGATTCAGAAGGTTCTCACCAAGTATGAAGAGTTGAATAAACCTGCTGTTGCTCCTCCTCCTCTTAGGCAGGAACCTGCTATGATACCTGTTGCCATTGAGCCAGACGAGACGCCTCTTAATACTCAAGAAGACGCCTTGATTAGAAAGCCGGCTAGTTCGAGAGTTGGCGGTCATGGAGGCAATGACAATGATGATATGATGGATGATCTTGATGAGATGATATTTGGCAAAAAAAGTGGGGATGCATCACCAAATGCAGGCCAAGATCCAAAGAAGCAGCAGTCCTCTAAAGATGATAATCTCATTTCATTCTAA 1203 0.4431 MSDNLMDKVSALGERLKIGGSEMGRKMSEGMSSMSLKMRELFQAASETDKVVDDATSETLDEPDWAMNLELCDSINNDQVNSVEVIRSIKKRIMVKSPKVQYLAMVLLETCVKNCERAFTEVAAERVLDEMVKLIDDPQTVVNNRNKALTLIEAWGESTSELRYLPVYEETYKSLKSRGIRFPGRDNESLAPIFTPPHSVTASEVHVDQSGQVQQDLPVRTFTPEQTKEAFNVARNSIELLSTVLSSSPQQDVLQDDLTATLVQQCHQSQFTVQRIVETAGDDEALLFEALNVNDEIQKVLTKYEELNKPAVAPPPLRQEPAMIPVAIEPDETPLNTQEDALIRKPASSRVGGHGGNDNDDMMDDLDEMIFGKKSGDASPNAGQDPKKQQSSKDDNLISF 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01359 400 MobiDBLite consensus disorder prediction 382 400 - -
Accr13g01359 400 PIRSF TOM1 32 399 IPR014645 -
Accr13g01359 400 Gene3D - 213 310 IPR038425 -
Accr13g01359 400 Gene3D - 40 200 IPR008942 -
Accr13g01359 400 PANTHER TOM1-LIKE PROTEIN 1 1 398 IPR044836 GO:0035091|GO:0043130|GO:0043328
Accr13g01359 400 MobiDBLite consensus disorder prediction 340 400 - -
Accr13g01359 400 CDD GAT_GGA-like_plant 231 307 - -
Accr13g01359 400 Pfam VHS domain 45 179 IPR002014 GO:0035091|GO:0043130
Accr13g01359 400 Pfam GAT domain 235 308 IPR004152 GO:0035091|GO:0043130
Accr13g01359 400 FunFam TOM1-like protein 2 41 200 - -
Accr13g01359 400 ProSiteProfiles GAT domain profile. 222 309 IPR004152 GO:0035091|GO:0043130
Accr13g01359 400 ProSiteProfiles VHS domain profile. 55 183 IPR002014 GO:0035091|GO:0043130
Accr13g01359 400 SUPERFAMILY ENTH/VHS domain 42 183 IPR008942 -
Accr13g01359 400 SMART VHS_2 48 179 IPR002014 GO:0035091|GO:0043130
Accr13g01359 400 SUPERFAMILY GAT-like domain 180 309 - -
Accr13g01359 400 CDD VHS 49 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01359 Accr-Chr13 20143738 20146883 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01359 - - vvi:100263154 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g01359 13 20143738 20146883 Accr13g01359 13 20143738 20146883 ECH