Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01227 ATGGCCGTGACTCTCACGAAATTGAAGATCTCACTGCTATTGTTGTTGAGCCTCTTCCTCGCATCATGGGCTTCAAGCTCCGGGAAAGTTCCTCCGATATGCCACCGCATCGATTGCATTCCCTATGATGTGATTCACGTCGGCGACGGCTACGAAATCCGCCACTATAACTCCAATGTCTGGGTCTCCACCCCCTTCATTAAAGGCACTTCTTTTGTTGAAGCTACTAGAACCGGTCTCGGATGGATATTTGATTATGTTCAAGGGAAGAACGATTACAAGCAAAAAATTGAAATGACAGCACCCATAATCACTGAAGTAGCACCCTGTTATGGAGGCCTGTGTGTGTCCACATTTCATGCAAACTTCTATATGCCGAAGAAGAACCACGCGAATCCACCTCCCACGAGCGATCTCTTTGTGGTAAGATCGAAGCCTGTGTATGCAGCAGCAAGGAAGGTAAGTGGGTATGTGAGAGATTTTAATGTTGGGGAAGAAGCTGCTGCCTTGAAGGCTAGTATTGCAGGCACTGAGTGGCTTTATGCCATTGAAAAGAGCAACAGAAGTGGATATGGTTCTGTTTACTGTGTTGCTCAGTACAATAACCCTTTTGAGTATGAGAGTGAGGTGAATGAGGTTTATTTCTTGTTTGATGATTTGGAGAATGGAAGCCACTCTATCTAA 684 0.4532 MAVTLTKLKISLLLLLSLFLASWASSSGKVPPICHRIDCIPYDVIHVGDGYEIRHYNSNVWVSTPFIKGTSFVEATRTGLGWIFDYVQGKNDYKQKIEMTAPIITEVAPCYGGLCVSTFHANFYMPKKNHANPPPTSDLFVVRSKPVYAAARKVSGYVRDFNVGEEAAALKASIAGTEWLYAIEKSNRSGYGSVYCVAQYNNPFEYESEVNEVYFLFDDLENGSHSI 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01227 227 PANTHER HEME-BINDING PROTEIN-RELATED 27 218 IPR006917 -
Accr13g01227 227 FunFam Heme-binding protein 2 37 223 - -
Accr13g01227 227 SUPERFAMILY Probable bacterial effector-binding domain 30 217 IPR011256 -
Accr13g01227 227 Pfam SOUL heme-binding protein 38 215 IPR006917 -
Accr13g01227 227 Gene3D Regulatory factor, effector binding domain 36 224 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01227 Accr-Chr13 16257747 16259084 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01227 - - gmx:100305993 248.825