Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01013 ATGGACCCTGATGTTATGGAAATCCCTCCCCCAATTCATCGCCCTACGAAACTGATGAAACAGAAGGCTATTATTAGTGACGTGATTGACGTAGACAATGATGAGGACCCTACTGATTTAGTGTTTATTGGTGAAAAAGTTGGTGGGAGCAACAAGGGAAAGGAATTGTCTGGTGATATTTGTTCCCCACCCTCTCTGGAACAATTCGGACCACCTAGTGTTCTTGCATCCACCAGTGGTTTTGCTTCAGTATCACATAATGTAATCAATGTTGATGGTCACAGTTCTGATCTATCAAATGATGATGATGACTACAATGATCATTTTGCTGAAGATTTAATGGATGTCGATGAGTACGCCCTGTTACAGGCACACTTTGACCATGTGGATTTACCTGCTGGAATTGAGGCACCCATTCCTTGGATGTCAAATTTTGATCTGGAATTGAAGAATTCTGAAATGAATTCTTTGAATCCTTGGGGTAATATGCCTTTAGATGCTAAAGGTTCTCATGTGACAGAGTTATCTCAGCTTTCATGGGCAATGGAGTCTTCTGAGCTCATCCAAGAAGCTCCAGTAGGTAGTTCTAGTTCACTAACAAAAAATGTTGCCATTAATCCTCATTCTCAAAAATTGTCTTCTCAGTTACAAGCTGAAGCTGCTTCTAATAAAAAGAAATCAAATTTTTCACAAGTTGATGGGCATAAGCTGAACTTGAATCTAGCACTAGGGGTAGATTCATCCAAACCTCATTGGTTCAAGGGACCTTTTGGTCGTAAGAAGAAGCTTTCTATTTTAGGTGAATTTCATAATGATTCTTTAGCACACCAGTCAGAGTCCTCAAAGCCGCCACATGGAGTTGAACCCCCTTATTGGTGGAAAGCTAAAAGTGCAAAAAAGGCACATGGCAAAGATGTTTTGTCCCATTCACATTTCTTTCCACCTTTTGAAGGGTCATACCATATTCCTGGACTGGAATCAGCAAACTCTAATATGTGGAAGAATCCTCCTAATCCACCTTTTACAGATCATTCAGATAATTCAGGTTTTTATTATCCATACGATCCTCTTGATGCCCCTCTTCCACCAATGTTTGGGAATACTTGGTTTCACAATAATGCTAGTGATGAAAAGAATGAAACTACTGCTAACATCCCAGTTGTCACAATACCTGATGAAGATAGGGATGAAATCTTGAGGAAATTCCAACAGTTTAAACAGTTTGACACAGTTGAAGACACTTCAGACCATTACTATAATCGCAAGAGTTATTCCTTGAAGCAGCATTCAAAAGCTTGGTCAAAGAAAATTCAGGAAGAGTGGAGGATTCTGGAGAAGGATTTGCCTGATACGATTTTTGTTAGGGTTTATGAATCGAGGATGGATATTTTGAGAGCTGTAATTATTGGGGCAGAGGGAACTCCTTATCATGATGGTCTCTACTTTTTTGATGTTTTCTTTCCCACTGGCTACCCCAATGTGCCACCAGAGGTCCACTACCACTCTGGTGGTGTTAGGATCAACCCAAATTTGTATAACTGTGGCAAAGTATGCCTGAGTCTGCTCAATACTTGGTCTGGCAATAAGAATGAGAAGTGGCTTCCTGGTGTTTCAACAATTCTACAGGTTCTTGTTTCTATACAAGGTTTAATCTTGAATGCAAAGCCTTATTTTAATGAGCCTGGTTTTGCTCATATGAGTGGTTCTGCCTCGGGCGAAATGAGGTCCCTGCAGTACAACGAGGATGCATTTCTTCTGTCATTGAAGACAATGATGTACGTGATGAAAAAGCCTCCAAAGCATTTTGAGGACTTTGTCGCAGGGCATTTCTGCAACCGGGCTCATGATGTCTTGGTGGCATGTAAAGCATACATGGATGGTGCTCAAGTTGGCTGTTTGGTCAAAGGTGGGGTGCAGGATGTTGACGCTGGTGACCGGAGTTGCTCAAAGCCGTTTAAGGATACGTTAGCTGGATTTGTGAATAGGCTTGTTGGAGAATTTTCCAAAGTTGGAGCTAAGGACTGTGAGAAATTCTTGCCACAGGCGGTGGCTACAACTGGGAACATGCAAGCAGGTTGTAACCCTGATGTTGCTGCTCCTGCTACCTGA 2109 0.4168 MDPDVMEIPPPIHRPTKLMKQKAIISDVIDVDNDEDPTDLVFIGEKVGGSNKGKELSGDICSPPSLEQFGPPSVLASTSGFASVSHNVINVDGHSSDLSNDDDDYNDHFAEDLMDVDEYALLQAHFDHVDLPAGIEAPIPWMSNFDLELKNSEMNSLNPWGNMPLDAKGSHVTELSQLSWAMESSELIQEAPVGSSSSLTKNVAINPHSQKLSSQLQAEAASNKKKSNFSQVDGHKLNLNLALGVDSSKPHWFKGPFGRKKKLSILGEFHNDSLAHQSESSKPPHGVEPPYWWKAKSAKKAHGKDVLSHSHFFPPFEGSYHIPGLESANSNMWKNPPNPPFTDHSDNSGFYYPYDPLDAPLPPMFGNTWFHNNASDEKNETTANIPVVTIPDEDRDEILRKFQQFKQFDTVEDTSDHYYNRKSYSLKQHSKAWSKKIQEEWRILEKDLPDTIFVRVYESRMDILRAVIIGAEGTPYHDGLYFFDVFFPTGYPNVPPEVHYHSGGVRINPNLYNCGKVCLSLLNTWSGNKNEKWLPGVSTILQVLVSIQGLILNAKPYFNEPGFAHMSGSASGEMRSLQYNEDAFLLSLKTMMYVMKKPPKHFEDFVAGHFCNRAHDVLVACKAYMDGAQVGCLVKGGVQDVDAGDRSCSKPFKDTLAGFVNRLVGEFSKVGAKDCEKFLPQAVATTGNMQAGCNPDVAAPAT 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01013 702 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 170 674 - -
Accr13g01013 702 MobiDBLite consensus disorder prediction 210 231 - -
Accr13g01013 702 SMART ubc_7 435 592 - -
Accr13g01013 702 SUPERFAMILY UBC-like 421 601 IPR016135 -
Accr13g01013 702 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 432 592 IPR000608 -
Accr13g01013 702 CDD UBCc 434 561 IPR000608 -
Accr13g01013 702 FunFam Probable ubiquitin-conjugating enzyme E2 23 395 671 - -
Accr13g01013 702 Gene3D Ubiquitin Conjugating Enzyme 392 664 IPR016135 -
Accr13g01013 702 Pfam Ubiquitin-conjugating enzyme 437 559 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01013 Accr-Chr13 12161515 12167034 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01013 371 682 Miscellaneous Gene Families AT2G33770 46.605 8.41e-87 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01013 K10581 - pcin:129313821 943.34