Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00884 ATGGCTCATTTACTATCTCCAGTTTACACTGAGCCTCTCAAAATCCACAATCCCGTACTGAATCTTACTTCTCCATCTTCATGGCGACTTCTCGCTAGGACTTCCAGTCATTGCAAGTTTGGGAATGATTCTGCAAAGCGAAGATGTTTTGGTAGGATTAAGGTTACTGCTGAGGACTCAGCTTCTAGTACTCTCCCTGATTTTATTGCAGATGACTATTACGCTGTTCTTGGCCTGCTTCCAGATGCCACGCCGGAGCAGATTAAGAAGGCTTACTACAAATGTATGAAGGCTTGCCATCCAGACTTGAGTGGCGATGATCCTGAGACAACAAACTTTTGCATGTTCATCAATGATGTGTATGAGGTACTCAGTGATCCTGTTCAACGCATGGTTTATGATGAAATTCATGGGTATTCTTTGACTTCCATCAATCCTTTCTTGGATGATTCTAGTCCAAAAGATCATGTTTTCGTTGATGAGTTCAGCTGCATAGGTTGCAAAAATTGCGCCAATGTGGCCTCTGATGTGTTTGCAATAGAGGAAGACTATGGAAGAGCCAGAGCAAACAGCCAGTGTGGAAAAACTGAATTAGTTCAACAAGCAATTGATAGTTGCCCTGTTGACTGCATTCATTGGACATCTGCGGCACAACTATCATTACTCGAAGATGAAATGCGACGGGTAGAAAGAGTCAATGTCGCCTTCATGCTTTCAGGAATGGGATCATCATCAATGGATGTTTTTAGAATGGCAAGCTCCAGATGGGAAAAGAGGCAGACAAAAGTCTTGGAACAAGCGAAAAGGAGAATGATGAAGCAGAATGGTTCTGCCAAGACAAATTCTTACTGGGACAACCTTTGGGGCAAAGCAAAAGACTACAAAAATTCAGAGGAGGAAGTGAAAGAGAGAGAAAAGAGAGCTGCTGCAGCGGCACGAAGATGGAGGGAGTACTCAAGGAGGGGTGTTGACAAGCCTCCGACATTCAAACTTCCAGAGGCAACCTCTGGCAAGGACAACTGA 1023 0.4399 MAHLLSPVYTEPLKIHNPVLNLTSPSSWRLLARTSSHCKFGNDSAKRRCFGRIKVTAEDSASSTLPDFIADDYYAVLGLLPDATPEQIKKAYYKCMKACHPDLSGDDPETTNFCMFINDVYEVLSDPVQRMVYDEIHGYSLTSINPFLDDSSPKDHVFVDEFSCIGCKNCANVASDVFAIEEDYGRARANSQCGKTELVQQAIDSCPVDCIHWTSAAQLSLLEDEMRRVERVNVAFMLSGMGSSSMDVFRMASSRWEKRQTKVLEQAKRRMMKQNGSAKTNSYWDNLWGKAKDYKNSEEEVKEREKRAAAAARRWREYSRRGVDKPPTFKLPEATSGKDN 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00884 340 Gene3D DnaJ domain 59 146 IPR036869 -
Accr13g00884 340 Coils Coil 294 314 - -
Accr13g00884 340 SMART dnaj_3 71 129 IPR001623 -
Accr13g00884 340 SUPERFAMILY 4Fe-4S ferredoxins 156 213 - -
Accr13g00884 340 PANTHER OS01G0730500 PROTEIN 1 321 - -
Accr13g00884 340 PRINTS DnaJ domain signature 74 92 IPR001623 -
Accr13g00884 340 PRINTS DnaJ domain signature 109 129 IPR001623 -
Accr13g00884 340 PRINTS DnaJ domain signature 92 107 IPR001623 -
Accr13g00884 340 Pfam 4Fe-4S single cluster domain of Ferredoxin I 159 213 - -
Accr13g00884 340 MobiDBLite consensus disorder prediction 312 340 - -
Accr13g00884 340 CDD DnaJ 72 126 IPR001623 -
Accr13g00884 340 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 155 183 IPR017896 -
Accr13g00884 340 Gene3D - 155 215 - -
Accr13g00884 340 MobiDBLite consensus disorder prediction 312 327 - -
Accr13g00884 340 PRINTS 3Fe-4S ferredoxin signature 159 170 IPR001080 GO:0005506|GO:0009055
Accr13g00884 340 PRINTS 3Fe-4S ferredoxin signature 199 211 IPR001080 GO:0005506|GO:0009055
Accr13g00884 340 PRINTS 3Fe-4S ferredoxin signature 170 180 IPR001080 GO:0005506|GO:0009055
Accr13g00884 340 SUPERFAMILY Chaperone J-domain 72 163 IPR036869 -
Accr13g00884 340 ProSiteProfiles dnaJ domain profile. 72 137 IPR001623 -
Accr13g00884 340 Pfam DnaJ domain 72 134 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00884 Accr-Chr13 10171245 10176209 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00884 - - vra:106778489 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00884 13 10171245 10176209 Accr13g00884 13 10171245 10176209 ECH