Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00862 ATGGAGTCTATATTGGCGAGGGCATTGGAGTACACTCTCAAGTATTGGCTCAAATCCTTCTCTAGAGATCAATTCAAGTTGCAGGGTCGGACCGTGCAGCTCTCGAATCTAGATTTAAACGGGGATGCTTTGCATTCGAGTGTTGGATTGCCGCCTGCTTTGAATGTTGCGACGGCGAAAGTGGGGAAATTGGAGATCATTCTGCCTTCGGTGAGCAACGTACAAATAGAACCCATCATTGTGCAAATTGATCGACTTGATTTGGTTCTTGAGGAGAATGCTAATTTTGATGCATCTGCAAGTCCAAAGTGTGCCACTCCATCTACTGCCTCCACGAAGGGTAGCGGATATGGTTTTGCTGATAAGATTGCAGATGGAATGACCATACAGATTCATACAGTCAACTTGTTACTTGAAACTCGTGGAGGTGCTTGCAGCCAAGGGGGATCAACTTGGGCACCACCTATGGCATCTATTACCATATGCAATCTTTTGCTCTACACTACAAACGAAGAATGGCAGGTTGTAAATCTTAAGGAAGCACGGGAGTTCTCCAGCAACAAGTACATTTACGTGTTCAAAAAACTTGAATGGGAATCTTTGTCTATTGATCTTTTGCCACATCCTGACATGTTCACGGGTTCTACTTTAGGCCGCTCTCAAGAGGGAGCGAACCAGAGAGATGATGATGGTGCCAAGAGAGTTTTTTTTGGAGGCGAGCGATTCCTAGAAGGCATATCTGGAGAGGCATATATTACAATTCAGAGAACTGAATTAAACAGTCCACTTGGACTTGAGGTTCAGTTACACATTACTGAAGCTGTGTGCCCTGCATTAAGTGAACCAGGACTGCGTGCTCTGCTCCGCTTTATGACGGGTATATATGTCTGCCTAAGCAGAGGAGATGTTGATTTTAAGGCTCAACAGCTGTCCACAGAAGCAGCTGGGCGCTCTCTTGTCTCTATTGTCGTGGACCACATATTTTTTTGCATTAAAGATGCTGAATTCAAGCTTGAGCTTTTAATGCAGTCTCTCTTCTTTTCTCGGGCTAGCATTTCTGACGATGACGACTCTAACTTGACAAGGATTACAATTTCTGGACTATTTCTGAGGGATACCTTCTCACGCCATCCATGTACGTTGGTGCAACCATCAATGCATGCTATGACGAGAGAAGCTTTCCATGTGCCAGAGTTTGCTAGGAGCTTTTGTCCTCCAATATATCCATTAGGCGAACAGAAGTGGCAACTAATTGAGGGTACCCCTCTAATATGCCTTCATTCCCTACAGATCAAGCCATCTCCACTCCCACCAGCCTTTGCTTCTCAAACTGTTATTGACTGTCAGCCTCTGATGATTCATCTCCAAGAAGAATCTTGCTTGAGGATTTTTTCTTTCTTAGCTGATGGTATCGTTGTCAATCCCGGTGATGTTTTGCCGGATTTCTCAGTTAATTCTCTCATTTTCACACTTAAGGGACTAGATCTTACAATTCCTTTGGACGAGACGCAAATAAATATTCCTGAAAGCAACATGGACAGTGCAGTCCAGAGCTTCTTTTCTGGAGCAAGGCTTCACATTGAAAGCCTTTTGTTTTCAGATTCACCCTCTTTGAAACTGAGAATGCTGAACCTGGAGAAGGATCCTGCTTGTTTCTGTCTTTGGGAAGGTCAACCAATTGATGCTAGCATTAAGAAGTGGACTGCTAAAGCATCACATCTCTCGTTGTCTCTAGAAACATGTAAAGGAGAAACAGGGTCTCAGAATTCTCACGGATGGAGTGCTGGATTATATAGATGTGTTGAACTGAAAGATGCTTGTGTTGAAGTAGCTATGGCAATGGCTGATGGCAGTCCATTATTAGAAGTTCCTCCACCAGGAGGTATTGTAAGGGTTGGAGTTGCATGTGAACGATTTCTAACCAACACTTCTGTTGAACAGTTATATTTTGTTCTTGATCTCTATGCTTATTTTGGGAGAGTTGGTGAGAAAATAGCAAAAGCTGGAAAAAGTAAACGACTGATAGATGCTAGGGGGAAATCTTCTAGTAGAAAGCTTTTGGACAAATCTTCTAGTATAAAGCTTATGGACAAGGCTCCTTGTGACACTGCTGCAAGTTTAGCAGTGAAAGACCTACAACTTCGATTTCTGGAATCTTCTTTAATGAATGTTGAGGAAATGCCTCTAGTGCAGTTTATTGGAGATGATCTGTTCATTAGTGCCACTCATAGAACCCTTGGTGGTGCCATTGTTGTTTCATCGGCTTTACGTTGGCAGAGTGTTGAAATAGATTGTGTGGATGCTGAGGTGCCCCTGGCACATGGAAATGGTTCAATTTTGAATTCTCTTGAAAGTATTCCCTCAATGAGTGGTAATGGATACCCTCAATTAAGAGCTGTATTTTGGATTAATAACAAAAGGAACAATCTATCAAATGGAAATGCTCTCTCATTTCCTTTTCTGGATTTACTCATGGAACATGTCATTTCATTGAATGAACAAGACATAGAGTCACATAGTTTGAATGTCTCAGCTTCTATTTCTGGTGTTCGCCTTGGTGGAGGAATGAACTATACCGAAGCCCTGCTGCATCGCTTTGGAATACTAGCACCTGATGGTGGCCCTGGACTGGAACTTTCTAAAGGTCTAGAAAACATAAAATCAGGACCATTGTCTAAACTCTTTAAGACGGGACCTCTTCTTGTTGATAATCCAGGAGATGATGGAAGTGCGAATGATGTTGATGGGAAGGAATCAAACTTTTTACTCTTGAAGAAGCCAGATGATGTGGATGTTGCTGTAGAATTAAGAGATTGGTTATTTGCTCTTGAAGGGGCTCAAGAGATGGCTGAAAGTTGGTGGTTCTCCAGCCATGAAGATGTAGGCAGAGTTGAGAGGTGTTGGCACACAACTTTCAACAGTCTACGAGTACATGCCAAAAGCAGCCCAAAGGATGTTTCTAATGGAAGAACACAATTGAATGGAACGCAACAATTTCCTGTACAGCTGATTACGGTTGGAGTTCAAGGGTTGGAGATCTTCAAGCCCCATACGCGGAAGGACGTTCCCTCATCCATGTTAATTGGCAATGGGATTAAGCAGCCCGCTGACACGGTTGGGGGAGCTGGTCTTGAAGTTCGCTTGGTACTGTGTGAGGAGGACAATTTTGATAATGAAATGACTAACTGGAAAGTGGAAAACGTAAAATTCTCTGTTGAACAACCGATTGAGGTGGTTGTGACCAAGGATGAGGTTCAGCACCTTGCTTTTCTGTGCCAATCTGAAATTGACTCAATGGGTCGGATCACAGCTGGGATTCTACGGCTCCTTAAGTTGGAAGGTTCTGTTGGCCAGTCTGCAATGGATCAATTAAGCAACCTAGGAACTGAAGGCATAGACAAGATTTTCTTCCAGAGAGAAGGTAGCAGCCGATCTCCATTGTCAACCCCAACCAGTGAAAGCCCAAGCAGAACAAAGAAACGAACTTTAAATTTGCTCGAGGAGGCAGTCATGGATTCACAGGCCAAACTTGACGCTTTAGTTACTGAAGTTGGTAATTCAGAGTCTTCCAGTCAGCACCTTAATGCTGTGAATGAAGTCCGTGAAAAGATTGAGACTATGCAGAATCTATTGATGCAATTGAGGAATCAACTTTAG 3657 0.4312 MESILARALEYTLKYWLKSFSRDQFKLQGRTVQLSNLDLNGDALHSSVGLPPALNVATAKVGKLEIILPSVSNVQIEPIIVQIDRLDLVLEENANFDASASPKCATPSTASTKGSGYGFADKIADGMTIQIHTVNLLLETRGGACSQGGSTWAPPMASITICNLLLYTTNEEWQVVNLKEAREFSSNKYIYVFKKLEWESLSIDLLPHPDMFTGSTLGRSQEGANQRDDDGAKRVFFGGERFLEGISGEAYITIQRTELNSPLGLEVQLHITEAVCPALSEPGLRALLRFMTGIYVCLSRGDVDFKAQQLSTEAAGRSLVSIVVDHIFFCIKDAEFKLELLMQSLFFSRASISDDDDSNLTRITISGLFLRDTFSRHPCTLVQPSMHAMTREAFHVPEFARSFCPPIYPLGEQKWQLIEGTPLICLHSLQIKPSPLPPAFASQTVIDCQPLMIHLQEESCLRIFSFLADGIVVNPGDVLPDFSVNSLIFTLKGLDLTIPLDETQINIPESNMDSAVQSFFSGARLHIESLLFSDSPSLKLRMLNLEKDPACFCLWEGQPIDASIKKWTAKASHLSLSLETCKGETGSQNSHGWSAGLYRCVELKDACVEVAMAMADGSPLLEVPPPGGIVRVGVACERFLTNTSVEQLYFVLDLYAYFGRVGEKIAKAGKSKRLIDARGKSSSRKLLDKSSSIKLMDKAPCDTAASLAVKDLQLRFLESSLMNVEEMPLVQFIGDDLFISATHRTLGGAIVVSSALRWQSVEIDCVDAEVPLAHGNGSILNSLESIPSMSGNGYPQLRAVFWINNKRNNLSNGNALSFPFLDLLMEHVISLNEQDIESHSLNVSASISGVRLGGGMNYTEALLHRFGILAPDGGPGLELSKGLENIKSGPLSKLFKTGPLLVDNPGDDGSANDVDGKESNFLLLKKPDDVDVAVELRDWLFALEGAQEMAESWWFSSHEDVGRVERCWHTTFNSLRVHAKSSPKDVSNGRTQLNGTQQFPVQLITVGVQGLEIFKPHTRKDVPSSMLIGNGIKQPADTVGGAGLEVRLVLCEEDNFDNEMTNWKVENVKFSVEQPIEVVVTKDEVQHLAFLCQSEIDSMGRITAGILRLLKLEGSVGQSAMDQLSNLGTEGIDKIFFQREGSSRSPLSTPTSESPSRTKKRTLNLLEEAVMDSQAKLDALVTEVGNSESSSQHLNAVNEVREKIETMQNLLMQLRNQL 1218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00862 1218 Coils Coil 1197 1217 - -
Accr13g00862 1218 PANTHER UNCHARACTERIZED 1 1216 IPR026728 -
Accr13g00862 1218 Coils Coil 1163 1183 - -
Accr13g00862 1218 Pfam N-terminal region of Chorein or VPS13 1 98 IPR026854 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00862 - - gmx:100811661 1732.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00862 13 9832098 9840305 Accr13g00862 13 9832098 9840305 ECH