Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00859 ATGCAGCTGCACATATCACCAAGTTTGAGGCATGTGACAGTGCTGCCAACAAAAGGTTTCAAAGATTTCATAAAAGTGAAGATTGCATCAGGGAAGGTGTCTTACAGGATGCTCTTCTATGTCCTCTTGCTCTTCACTTTCCTTCTTCGTTTTGTCTTTGTGTTGACTGCTGTTGAATCCATTGATGGAGATTTCAAGTGCTCTACCATAGGTTGCCTGGGGAAAAAAATAGCACCAAGGATTCTGGGAAGAAAAATTGAATCAACTGTCCCAGAAGTGATATACAAAGTATTAGATGAACCAGTTGAGAAGGATGAAGTAGAAGGAAGATCTGATATTCCACAGACTTTGGAAGACTTCATGACTGATATGAAGGAAGGTGGATATGATGCGCAAACATTTGCTATCAAACTCAGAGAAATGGTCATCCTCATGGAAAAGAGGACCAGGACAGCCAAAATCCAAGAATACCTATATCGCCATGTAGCGTCAAGCAGCATACCTAAGCAGCTTCACTGCCTTGACCTGAGTCTGGCCAGTGAACACACCAACAATGCACAAGCTCGCCTTCAGCTTCCTCCTGCAGAACTAGTCCCTGCCTTGGTTGATAACTCCTACTTCCATTTTGTTCTTGCATCTGACAATGTTCTGGCTGCTTCTGTGGTTGCCACCTCACTGGTCCGAAACTCTAGGCGACCTGGCAAGGTGGTCTTGCACATCATTACAGATAGAAAGACTTACTATCCCATGCAAGCTTGGTTCTCATTGCACCCTCTGTCACCTGCTATAATCGAGGTCAAGGCATTGCACCATTTTGATTGGTTTGCGAAGGGAAAGGTGCCTGTTCTTGAAGCAATGGAGAAAGATCAACACGTGAGGTCACAGTTCAGAGGGGGGTCATCAGCTATCGTTGCGAATAGTATTGAGAAACCACAAGTTGTTGCGGCAAAATTGCAAGCTCTAAGCCCCAAGTATAACTCTATGATGAACCACATAAGGATACATCTTCCAGAGTTGTTCCCTAGTCTCAACAAGATAGTCTTCCTAGATGATGACATTGTTGTACAAACTGATCTTTCACCTCTGTGGGACGTTGAGATGAATGGAAAAGTAAATGGAGCAGTAGAAACATGTACTGGAGAAGATAAGTTTGTGATGTCAAAGAGGTTGAAAAGCTATTTGAATTTCTCTCATCCCTTGATAGCCGAAAACTTCGACCCTGATGAATGTGCTTGGGCTTATGGCATGAACATTTTTGATCTTGAAGCTTGGAGGAATACAAATATAAGCCTGACATACTATCATTGGGTTGAGCAGAATATAAAATCAGATTTGAGTCTCTGGCAGCTAGGGACATTACCTCCTGGATTGATAGCTTTCCATGGTCACGTGCACTTAATTGATCCTTTCTGGCACATGCTGGGGTTGGGATATCAAGAAAAAACAAGGTTTTCCGATGCTGAGAGTGCCGGTGTGATCCATTTTAATGGCAGGGCGAAGCCATGGCTAGACATAGCTTTTCCACAGCTAAGGCCCCTGTGGGCTAAATATGTCAACTTTTCAGACAAGTTCATCAAGAGCTGTAATATTCGAGCATCATAG 1602 0.4338 MQLHISPSLRHVTVLPTKGFKDFIKVKIASGKVSYRMLFYVLLLFTFLLRFVFVLTAVESIDGDFKCSTIGCLGKKIAPRILGRKIESTVPEVIYKVLDEPVEKDEVEGRSDIPQTLEDFMTDMKEGGYDAQTFAIKLREMVILMEKRTRTAKIQEYLYRHVASSSIPKQLHCLDLSLASEHTNNAQARLQLPPAELVPALVDNSYFHFVLASDNVLAASVVATSLVRNSRRPGKVVLHIITDRKTYYPMQAWFSLHPLSPAIIEVKALHHFDWFAKGKVPVLEAMEKDQHVRSQFRGGSSAIVANSIEKPQVVAAKLQALSPKYNSMMNHIRIHLPELFPSLNKIVFLDDDIVVQTDLSPLWDVEMNGKVNGAVETCTGEDKFVMSKRLKSYLNFSHPLIAENFDPDECAWAYGMNIFDLEAWRNTNISLTYYHWVEQNIKSDLSLWQLGTLPPGLIAFHGHVHLIDPFWHMLGLGYQEKTRFSDAESAGVIHFNGRAKPWLDIAFPQLRPLWAKYVNFSDKFIKSCNIRAS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00859 533 CDD GT8_like_1 207 519 - -
Accr13g00859 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 209 527 IPR029044 -
Accr13g00859 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 208 530 IPR029044 -
Accr13g00859 533 Pfam Glycosyl transferase family 8 210 506 IPR002495 GO:0016757
Accr13g00859 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 88 530 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00859 Accr-Chr13 9776480 9780082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00859 1 533 Glycosyltransferase AT5G54690 77.570 0.0 860
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00859 K20867 - qsa:O6P43_028959 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03058 1 67452229 67455375 Accr13g00859 13 9776480 9780082 CCT
Accr13g00859 13 9776480 9780082 Accr13g00859 13 9776480 9780082 ECH