Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00834 ATGTCTTTCGTTGCTGCTTCAACAACGTCACTTGTTCCTTCTTCATCAACCGATAATCTTGCAACCTCTGATCATTTGCGTCAACCTCTTGCAGATTATCATCCTACTGTTTGGAAGGATTATTTCCTTCAATTTGCTTCCGAATCTTTGGAAGTTGATGAAGAAATGGGGAAACAAATTGAGACAGTGAAAGAAGAAGTGAGGAAGATGCTTTTTATATCTGCGACGGAGAATCCCTTAACCAAAGTTGAACTGATTGATTCTATTCAACGTTTGGGGCTGTATTACCATTTTGAACGTGAGATTCATGAGCTGTTGCAGCTAATTCACAATACTTACGTCCAAAATAACCAAATTCTAACTCATACCCAAGATCTCTACTCTCTTGCTCTCCTCTTTAAGCTATTGAGGCAAGAAGGATATCGCATTTCACCCGATATGTTCAACAAGTTCAAGGATGAGCAAGGAAACCTCAATGAGAATATAGCATCAGATGTGGAAGGAATGCTGAGTTTGTATGAAGCTTCACATCTGAGTGTTCATGGAGAGAACATTTTAGACGAAGCACTTGCTTTCACCACGAACCATCTTTGCTCCGTCACAATCGAATCAAACCCTTTTCTGGCAGCAAAACTTGAGCAGAGCCTAAAGCAGAGTCCTTACAGGGGATTGCCAAGGCTAGAGGCACGTAAGTACATTTCCATATACCACTTGCATCCTTCGTGTAATCAACTTCTGCTGAAGTTGGCCAAATTAGATTTCAATATGCTCCAAAAACTGCATCAGAAGGAATTTGCCAATATCTGCAAGTGGTGGAACAAATTGGATGTGCAAAGAAATCTACCATATGTGAGAAACCGGATCGTGGAATTATGCTTTTGGATTCTCACGGTTTATTTTGAGTCAAAGTACTCTAAAGCTAGAAGTTTTATGGCCAAAGTGATAGGCCTGTTAACGATCGTTGATGATACATTCGATGCATATGGAACAATCGATGAACTAGAACTCATCAATAACGCAATCCAGAGGTGGGATATTGGTTGCTTGGATGATCTCCCAGAGTACAGCAAGTTATTTTACAAGGAACTGTTGAACGTGTTCCAAGAAATGTATGAAGACGAGAGGAAAGAAGGAAGATCATACAGTGTTCAGTATGCCAAACAAGAGCTTAAGAAGGGTGTACAAGCATACATGGAAGAAGCAAGATGGTTGAATAACAATTATATTCCAACAACAGAGGAATACATCAATGTATCAACTGTATCAGCAAGTTATGCAACGCTGTCCACTGTTTCTTTTGTCGGCATGGGAGATGTAGCCTCCGAGGATGTCTTCAAGTGGGCCCAAACTCACCCTAAAGCCATTAAAGCTTCGTCACTTATCTGCAGACTCATGGATGACATAGTCTCTAATGAGTTTGAACATAAAAGAGAGCACATTGCGTCACTCATACATTGCTATATGAGGGAAAAAGGAGTGACAAAGGAGGAAGCCATTGGTGAACTTGAGAAGAAGATAAAGAGTGCGTGGAAGGATATTAATGAAGAATTTTTTATGAGGCCGAGTAGAGTGCCAAAGCCAATTCTAATGAGAGTTCTAAACCTCACTCGTTTCATTGACGTCATGTATAAGAATACTGATAACTTCACTCATTCAGGAGGACTCATGAAAGACTCAATTCAACTTGTGGTCCTTGACCCTCTGCCAATATGA 1713 0.404 MSFVAASTTSLVPSSSTDNLATSDHLRQPLADYHPTVWKDYFLQFASESLEVDEEMGKQIETVKEEVRKMLFISATENPLTKVELIDSIQRLGLYYHFEREIHELLQLIHNTYVQNNQILTHTQDLYSLALLFKLLRQEGYRISPDMFNKFKDEQGNLNENIASDVEGMLSLYEASHLSVHGENILDEALAFTTNHLCSVTIESNPFLAAKLEQSLKQSPYRGLPRLEARKYISIYHLHPSCNQLLLKLAKLDFNMLQKLHQKEFANICKWWNKLDVQRNLPYVRNRIVELCFWILTVYFESKYSKARSFMAKVIGLLTIVDDTFDAYGTIDELELINNAIQRWDIGCLDDLPEYSKLFYKELLNVFQEMYEDERKEGRSYSVQYAKQELKKGVQAYMEEARWLNNNYIPTTEEYINVSTVSASYATLSTVSFVGMGDVASEDVFKWAQTHPKAIKASSLICRLMDDIVSNEFEHKREHIASLIHCYMREKGVTKEEAIGELEKKIKSAWKDINEEFFMRPSRVPKPILMRVLNLTRFIDVMYKNTDNFTHSGGLMKDSIQLVVLDPLPI 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00834 570 Pfam Terpene synthase, N-terminal domain 37 202 IPR001906 GO:0010333|GO:0016829
Accr13g00834 570 Gene3D Farnesyl Diphosphate Synthase 35 558 IPR008949 -
Accr13g00834 570 PANTHER OS04G0344100 PROTEIN-RELATED 28 551 - -
Accr13g00834 570 Pfam Terpene synthase family, metal binding domain 247 512 IPR005630 GO:0000287|GO:0010333|GO:0016829
Accr13g00834 570 SUPERFAMILY Terpenoid synthases 243 568 IPR008949 -
Accr13g00834 570 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 34 239 IPR008930 -
Accr13g00834 570 SFLD Terpene Cyclase Like 1 C Terminal Domain 243 568 IPR034741 -
Accr13g00834 570 CDD Terpene_cyclase_plant_C1 29 567 IPR044814 GO:0010333|GO:0016102
Accr13g00834 570 SFLD Isoprenoid Synthase Type I 243 568 - -
Accr13g00834 570 FunFam Isoprene synthase, chloroplastic 77 242 - -
Accr13g00834 570 Gene3D - 77 242 IPR036965 GO:0010333|GO:0016829
Accr13g00834 570 FunFam Isoprene synthase, chloroplastic 207 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00834 Accr-Chr13 9417630 9420850 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00834 K15803 - pcin:129314992 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00834 13 9417630 9420850 Accr13g00834 13 9417630 9420850 ECH