Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00823 ATGGCGGCCCTGAAGCTGCTTCTCTCTCAAGCTCGCCGCCATTACCTCACCAATCATCATTCTCATTTACACTCTTCCCTTTTTCTTGGGTGTCGGAGATCCCTTTGTTCTTCTTCTTCTTCGCAATCCGATGAATCAGACTCAAAACCTCCACCCCCTCCAAGTGGACCCTCCCCAACCATTTCAATCCAGCCTGTTGCATACCCGGTTAAACCTAAAGAGCCGTCACCTCTAGATACTACTGAATCCTCCGAAGCCCAATTACAAAATCAAACGCCGGCGCCGCCACCTCCTCGCCGTCCACGTGGACCAACATTGGCGGAAGATGCCGCGGAATCTAGGAGGGCTTGGACCAGGGAAGATATTCGGTATGTAAAGGACGCCTCGCCTTCGATATCGCCAGTGTCCTATCCTTTGCGAGTGGCGCCGCTTCCTGAAGATAAGACTACTGCTGGTGCTGAAGCAGGGAAGGATGATGGTGCGAAGGAGAACGAAGAAATCGAGAGGGAGACTAGAAAAATTAGGGCGGATGATCAGTTAAAGAGGAGAGTTATTAGAGCTGCAGAAGAGGAGAAGGTGCGGGTTCCTTTTCCAACACTGATAAAGGTGAAGCCAAAGGAGAAGGCGCCTATCCTTGATTTGACGGAGGCAATTCGCCAGGTTAAGGCCAATGCAAAGGCAAAATTTGATGAAACTGTTGAAGTGCATGTAAGATTGGGTATTGAATCAAAGCGAACAGAAATGGCAGTTCGTGGTACTATGATCCTGCCTCATGGTACGCCTAAGGCCGTCAGTGTGGCTGTTTTTGCAGAAGGAGCTGATGCGGAGGAAGCTAGAGCTGCGGGAGCTGATATAGTTGGTGGTAAAGAGCTTATTGAGGAGATTGCGAATGGTACTAACAAGCTTAGAGTTGATAAGTGCTTCTCAACCCCAGGAATGGCACCTCATCTTGGAAAGATAGCACAATACCTTAGAAAGCGTAGATTAATGCCAGACAAGAAACTAGGTACTCTGACCAGTGATATTCCTGGGCAATTGAAAGAGCTAAGACGTGGTCGTGTTGACTTTAAAATGGAGAGTAAATCAATTGTGCATGCAGGGATCGGAAAGGTAAGCTTCAGAGAGGATCAATTACGTGAAAACATAGGTGCATTCATGAATGATCTATTGGCTGCCAAACCTGCTGGCTTAAAGAAGACTTCAAAATATGCTGGTTATGTCCTATCTGTCCATATGTGCAGCACGATGGGCCCAGGATTCCCTGTTTCAATACAATCCTTATCAAGAGCAGCTGATAATTACAAGTCTCTGAATGTGGTATAA 1323 0.4724 MAALKLLLSQARRHYLTNHHSHLHSSLFLGCRRSLCSSSSSQSDESDSKPPPPPSGPSPTISIQPVAYPVKPKEPSPLDTTESSEAQLQNQTPAPPPPRRPRGPTLAEDAAESRRAWTREDIRYVKDASPSISPVSYPLRVAPLPEDKTTAGAEAGKDDGAKENEEIERETRKIRADDQLKRRVIRAAEEEKVRVPFPTLIKVKPKEKAPILDLTEAIRQVKANAKAKFDETVEVHVRLGIESKRTEMAVRGTMILPHGTPKAVSVAVFAEGADAEEARAAGADIVGGKELIEEIANGTNKLRVDKCFSTPGMAPHLGKIAQYLRKRRLMPDKKLGTLTSDIPGQLKELRRGRVDFKMESKSIVHAGIGKVSFREDQLRENIGAFMNDLLAAKPAGLKKTSKYAGYVLSVHMCSTMGPGFPVSIQSLSRAADNYKSLNVV 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00823 440 CDD Ribosomal_L1 214 422 IPR028364 -
Accr13g00823 440 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Accr13g00823 440 Gene3D - 214 422 - -
Accr13g00823 440 Gene3D - 259 352 IPR016095 -
Accr13g00823 440 PANTHER 54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL 126 433 - -
Accr13g00823 440 SUPERFAMILY Ribosomal protein L1 207 423 IPR023674 -
Accr13g00823 440 MobiDBLite consensus disorder prediction 36 115 - -
Accr13g00823 440 Pfam Ribosomal protein L1p/L10e family 222 418 IPR028364 -
Accr13g00823 440 FunFam 50S ribosomal protein L1 259 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00823 Accr-Chr13 9242334 9247073 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00823 - - lang:109351870 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00823 13 9242334 9247073 Accr13g00823 13 9242334 9247073 ECH