Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00814 ATGGCCGGGACTAACGCCCCCTGTCTCTCTCACCTTCCCGATGAGATCCTCACCATCGTATTCGCCGCCATATCCGACACTCGCACTCGCAACGCCCTCTCCCTCGTTTGCCGCACCTTCCGCCGTCTCGAGAGGCGGACCCGCACCTCCCTCACGCTCCGCGGCAACGCGCGTGACCTTCATTTCATCCCTGACTGCTTCGGCTATGTCATCGACCTCGACCTCTCTCTCCTTTCTCCTTGGGGCCACGGCCTCTTCGCCATCTCCTATCAGTCCGATCCCGGCCTCCTCGCCCACCGCCTTCGCTACGCCTTCCCCCGCGTCACTTCAATCACCGTCTACGTTCGCTCTGCCTCCACACTCCAGCTTCTCCTCAATGTTCACTGGCCAGAATTGCGCCACGTCAAGCTCGTCCGGTGGCATCAACGGCCAGCGTTGGCGCCGGGGTCCGATTTCGCCGTATTGTTCGAGAAATGTCAATCACTGTGGTCTTTGGACCTATCCAACTTCTACCACTGGGCAGAGGATCTCCCTCCGGTTCTGACGGCTAATCCGGCTACGGCCGCCTCGCTGAAGAGGCTGAACCTACTGACCACGTCGTTTTCAGAGGGATACAGGACTCATGAAATCCAGTCCATCACTGCGGTTTGCCCTAACCTCGAGCACCTTCTGGTAGCTTGTACCTTCGATCCAAGGTACCTTGGGTATGTTGGAGATGAGGCTCTGTCGGCAATAGCTTTGAATTGCCCTAAGCTATCGCTTCTTCATCTTGCCGATACATCGTCGTTGGCTAACCGGAGGGGTGATCCTCTCGACGAGGGGTATACTGCCGAGGATGCTAGGATTAGCCGTACAACACTAAATCAGTTGTTTTCTGGGCTTCCTATGCTTGAAGAGCTGGTGCTAGATGTTTGTAAGAATGTGAGAGACAGTAGCTTTGCCTTGGAAGTGCTGAATTCCAAATGCCCCAAGTTGAAGGTACTTAAGTTAGGCCAATTTCATGGGATTTGCTTGGCCATTGGGTCGCAGCTCGATGGGATTGCACTGTGCCAGGGACTTGAATCTTTGTCAATTAAGAATTGCGCAGATTTGACGGACATGGGTTTGATAGAGATTGCCAGAGGCTGCTCCAGATTGGTAAAGTTTGAAGTACAGGGATGCAAGCATATAACGGAGAAAGGGCTGAGGACGATGGCTTGCCTGCTTCGCAAGACTCTGATTGATGTTAAGATTTCTTGCTGCTTGAATCTTGATACCGCTGCATCTCTGAGAGCTTTGGAGCCAATTCGTGAGTGGATCGAGCGGCTTCACGTGGATTGTGTGTGGAATGACTTGAAAGGAACTGATAATCTTGGGGAAACCATCCTTGCTTTCGACCTCAATGGGTTTAATGAATCGTGCTCTTCATCCCCCAAGGCTGCTGGAGAGTTCGTGGATTACTTTGGGAGTAGTGCAGATTTAGAAGCAAGCAAAAGGAAGAGGCAGAGATGCAATTACTCAATGGAGGCCACTTGGAGCAACGGTAATGGTTATTTGTGCAATAGCTGGGAGAGGTTGAAATACCTTTCTCTTTGGATAGGAGTTGGGGAGCTGCTCACTCCATTGCCAATGGCAGGGCTGGAAGACTGCCCCGACCTGGAAGAGATTCGTATCAGGGTCGAAGGAGATTGCCGAGAGCGGCAAAGACTGACTGAGCGAGAATTTGGGCTGAGCATTCTCACTTGTTATCCTCAGCTCATAAAGATGCAGTTAGATTGTGGGGAGACAAGAGGTTATGCTCTAACGGCACCTTCGGGGCAGGTGGATTTGAGCCTGTGGGAGAGGTTCTTCCTCAATGGTATAGGCACTTTGACACTTGAGGAGCTTGATTACTGGCCACCACAAGATGAAGATGTGAACCAAAGGAGCCTATCTCTTCCAGCTGCTGGCTTGCTCCGAGAATGCGACACTCTGAGGAAGCTCTTCATTCACGGAACAACCCACGAGCATTTCATGAATTTCTTTCTTAAGATAAGCAACCTGAGGGATGTGCAGCTGAGGGAGGATTATTATCCAGCACCAGAGAATGACATGAGTACAGAGATGAGAGTGGCTTCATGCAGCCGCTTTGAAGATGCTTTAAACAGGCGTCTAATCTACGATTGA 2145 0.5156 MAGTNAPCLSHLPDEILTIVFAAISDTRTRNALSLVCRTFRRLERRTRTSLTLRGNARDLHFIPDCFGYVIDLDLSLLSPWGHGLFAISYQSDPGLLAHRLRYAFPRVTSITVYVRSASTLQLLLNVHWPELRHVKLVRWHQRPALAPGSDFAVLFEKCQSLWSLDLSNFYHWAEDLPPVLTANPATAASLKRLNLLTTSFSEGYRTHEIQSITAVCPNLEHLLVACTFDPRYLGYVGDEALSAIALNCPKLSLLHLADTSSLANRRGDPLDEGYTAEDARISRTTLNQLFSGLPMLEELVLDVCKNVRDSSFALEVLNSKCPKLKVLKLGQFHGICLAIGSQLDGIALCQGLESLSIKNCADLTDMGLIEIARGCSRLVKFEVQGCKHITEKGLRTMACLLRKTLIDVKISCCLNLDTAASLRALEPIREWIERLHVDCVWNDLKGTDNLGETILAFDLNGFNESCSSSPKAAGEFVDYFGSSADLEASKRKRQRCNYSMEATWSNGNGYLCNSWERLKYLSLWIGVGELLTPLPMAGLEDCPDLEEIRIRVEGDCRERQRLTEREFGLSILTCYPQLIKMQLDCGETRGYALTAPSGQVDLSLWERFFLNGIGTLTLEELDYWPPQDEDVNQRSLSLPAAGLLRECDTLRKLFIHGTTHEHFMNFFLKISNLRDVQLREDYYPAPENDMSTEMRVASCSRFEDALNRRLIYD 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00814 714 SUPERFAMILY RNI-like 149 418 - -
Accr13g00814 714 Gene3D Ribonuclease Inhibitor 87 472 IPR032675 -
Accr13g00814 714 CDD F-box_AtTIR1-like 9 48 - -
Accr13g00814 714 FunFam F-box/LRR-repeat protein 4 9 48 - -
Accr13g00814 714 SUPERFAMILY F-box domain 5 44 IPR036047 GO:0005515
Accr13g00814 714 PANTHER UNCHARACTERIZED 11 440 - -
Accr13g00814 714 SMART LRR_CC_2 217 248 IPR006553 -
Accr13g00814 714 SMART LRR_CC_2 376 401 IPR006553 -
Accr13g00814 714 SMART LRR_CC_2 350 375 IPR006553 -
Accr13g00814 714 SMART LRR_CC_2 294 319 IPR006553 -
Accr13g00814 714 Gene3D - 8 48 - -
Accr13g00814 714 Pfam F-box 11 49 IPR041567 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00814 Accr-Chr13 9119546 9121690 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00814 - - adu:107462359 1053.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00814 13 9119546 9121690 Accr13g00814 13 9119546 9121690 ECH