Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00811 ATGACGACTAGGAACATTGAGAAGATGGGTTCCATTGATGCTCAGCTGAGGTTGCTGGCTCCGGGAAAGGTGTCTGCTGATGATAAGCTTGTCGAGTATGATGCTTTGTTGATGGACCGATTCCTCGACATTCTTGAGGATCTTCACGGTGAAGACATCAGAGAAACGGTTCAAGATTGCTATGAGCTGTCAGCTGTATATGAAGGGGAGCATGACCCTCACAAGTTGGAGGAGCTTGGGAACAAGCTGACTGGTCTTGACGCCGGCGACTCTATCGTGGTGGCCAAATCCTTTTCTCACATGCTCAATTTGGCCAACTTGGCCGAGGAAGTCCAAATTGCCTACCGAAGAAGGATCAAGTTATTGAAGAAAGGCGATTTCGCCGATGAGAATTTGGCCATAACCGAATCTGACATCGACGAGACCTTCAAGAGGCTCGTCAATCAACTGAACAAGACCCCTAATCAAGTGTTTGAGGCTTTGAAGAACCAAACCGTAGATTTGGTCCTCACTGCTCATCCTACTCAGGCTGTCCGTAGATCTCTGCTTCAGAAGCATTCCAGGATAAGGAGTTGCTTAACTCAATTGTATGCTAAGGATATAACACCTGATGATAAGAAGGAACTTGACGAGGCCTTACAGAGAGAGATTCAAGCTGCGTTTCGTACGGATGAAATCAGGAGGAGTCCTCCCACGCCTCAAGACGAGATGAGGGCAGGAATGAGCTACTTTCATGAAACAATCTGGAAAGGTGTGCCTAAGTTTTTGCGCCGGCTCGACACGGCTCTCAAGAACATTGGAATAACTGAACGTGTGCCATATAATGCCCCTATTATTCAATTCTCTTCTTGGATGGGAGGCGATCGTGATGGAAACCCCAGAGTAACCCCAGAAGTTACAAGAGATGTTTGCTTGTTGGCTAGAATGATGGCTGCCAATTTGTACTTCTCTCAGATAGAAGACCTTATGTTTGAGCTGTCTATGTGGCGTTGCAACGACGAGCTCCGTGTTCGTGCTGATCAACTCCATAGTTCATCAAAGAGAGATGCAAAACATTATATAGAGTTTTGGAAGCGGATTCCTCCTAATGAACCTTATCGTGTTATCCTCGGTGACGTGAGAGACAAACTATATAATACTCGTGAACGCGCTCGCAAAATATTAGCTGATGGGACCTCTGATATCCCTGAGGAGACAACCTTCACAAATGTTGAACAGTTCATGGAGCCCCTTGAACTCTGCTATAGGTCACTATGTGCATGTGGTGACAGATCGATAGCTGATGGAAGCCTCCTTGATTTCTTACGGCAAGTTTCAACTTTTGGACTGTCACTTGTAAAGCTTGACATTCGTCAAGAATCAGACAGGCACACTGATGTCATGGATGCAATAACAAGGCACTTGGATATCGGTTCTTACCGAGAATGGAGTGAGGAACGCCGCCAGAAATGGCTCTTATCTGAACTCAGCGGCAAGCGTCCTCTCTTTGGCCATGATCTTCCCAAAACTGAAGAAATCTCTGATGTGTTAGAAACCTTGCATGTCATCTCAGAACTTCCAGCAGACAATTTTGGTGCCTACATCATCTCAATGGCAACATCTCCATCTGATGTGCTTGCTGTAGAGCTTTTACAACGAGAATGCAAAGTGAAAAAGCCATTAAGGGTTGTCCCATTGTTTGAAAAACTCGCTGATCTTGAGACTGCTCCCGCAGCTGTCGCTCGTCTTTTCTCTATAGATTGGTACAGAAGCCGAATTAACGGGAAGCAAGAAGTTATGATAGGATACTCGGACTCAGGGAAGGACGCTGGCCGCCTTTCTGCGACTTGGGCGCTATACAAAGCTCAAGAAGAGCTCATAAAGGTTTCAAAGAAGTTTGGCATTAAGCTTACAATGTTCCATGGCAGGGGAGGAACTGTTGGAAGAGGAGGAGGTCCTACTCATCTTGCAATACTATCTCAGCCGCCAGAGACCATTCATGGATCACTTCGAGTAACGGTTCAAGGTGAAGTCATTGAGCAGTCATTTGGGGAACAACACTTGTGCTTTAGGACACTTGAAAGATTCACTGCCGCTACATTAGAGCATGGAATGCATCCTCCCGTGTCTCCAAAACCAGAATGGCGAGCTCTCATGGATGAAATGGCAGTTACTGCAACAAACGAGTATCGCTCTTTTGTTTTCCAAGAACCCCGTTTCGTCGAGTACTTTCGAAGCGCAACACCTGAGTTAGAGTATGGACGCATGAACATTGGAAGCCGACCTTCAAAAAGAAAGCCAAGTGGAGGAATCGAATCACTTAGAGCTATTCCTTGGATCTTTGCTTGGACTCAAACAAGGTTTCACCTACCAGTATGGCTTGGCTTTGGTTCAGCATTCAAGCAAGTGATGGAGAAGGATTCCAAGAATCTCCAAATGCTTAGAGATATGTATAATCAATGGCCTTTCTTCAGAGTAACCCTTGATTTGATTGAGATGGTGTTTGCCAAAGGAGACCCAAGAATTGCTGCTTTATATGACAAACTCCTAGTGTCACCAGAACTAGAGCCACTTGGAGAGTGCTTAAGGTCTAAATATGAAGAAACCAAAAGCCTTCTTCTCCAGATTGCTGGGCACAGAGATGTTCTTGAGGGAGACCCTTACTTGAAGCAGAGACTCAGGCTTCGTGATTCGTACACGACGGCTCTGAATGTGTTGCAAGCTTACACATTGAAGCGAATCCGTAATCCAGACTACGATGTAAAGCTGAGGCCGCATTTATCAAAGGAGTACATGGAATCAAGCAAACCAGCTGCAGAACTTGTGAAACTGAACCCAACAAGCGAGTATGCTCCTGGTTTGGAGGACACTCTCATTTTGACCATGAAGGGTGTTGCTGCTGGCATGCAAAACACTGGATAA 2901 0.4574 MTTRNIEKMGSIDAQLRLLAPGKVSADDKLVEYDALLMDRFLDILEDLHGEDIRETVQDCYELSAVYEGEHDPHKLEELGNKLTGLDAGDSIVVAKSFSHMLNLANLAEEVQIAYRRRIKLLKKGDFADENLAITESDIDETFKRLVNQLNKTPNQVFEALKNQTVDLVLTAHPTQAVRRSLLQKHSRIRSCLTQLYAKDITPDDKKELDEALQREIQAAFRTDEIRRSPPTPQDEMRAGMSYFHETIWKGVPKFLRRLDTALKNIGITERVPYNAPIIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRVRADQLHSSSKRDAKHYIEFWKRIPPNEPYRVILGDVRDKLYNTRERARKILADGTSDIPEETTFTNVEQFMEPLELCYRSLCACGDRSIADGSLLDFLRQVSTFGLSLVKLDIRQESDRHTDVMDAITRHLDIGSYREWSEERRQKWLLSELSGKRPLFGHDLPKTEEISDVLETLHVISELPADNFGAYIISMATSPSDVLAVELLQRECKVKKPLRVVPLFEKLADLETAPAAVARLFSIDWYRSRINGKQEVMIGYSDSGKDAGRLSATWALYKAQEELIKVSKKFGIKLTMFHGRGGTVGRGGGPTHLAILSQPPETIHGSLRVTVQGEVIEQSFGEQHLCFRTLERFTAATLEHGMHPPVSPKPEWRALMDEMAVTATNEYRSFVFQEPRFVEYFRSATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGSAFKQVMEKDSKNLQMLRDMYNQWPFFRVTLDLIEMVFAKGDPRIAALYDKLLVSPELEPLGECLRSKYEETKSLLLQIAGHRDVLEGDPYLKQRLRLRDSYTTALNVLQAYTLKRIRNPDYDVKLRPHLSKEYMESSKPAAELVKLNPTSEYAPGLEDTLILTMKGVAAGMQNTG 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00811 966 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 592 604 IPR033129 -
Accr13g00811 966 PRINTS Phosphoenolpyruvate carboxylase signature 168 181 IPR021135 GO:0006099|GO:0008964|GO:0015977
Accr13g00811 966 PRINTS Phosphoenolpyruvate carboxylase signature 590 610 IPR021135 GO:0006099|GO:0008964|GO:0015977
Accr13g00811 966 PRINTS Phosphoenolpyruvate carboxylase signature 221 237 IPR021135 GO:0006099|GO:0008964|GO:0015977
Accr13g00811 966 PRINTS Phosphoenolpyruvate carboxylase signature 281 296 IPR021135 GO:0006099|GO:0008964|GO:0015977
Accr13g00811 966 PRINTS Phosphoenolpyruvate carboxylase signature 632 661 IPR021135 GO:0006099|GO:0008964|GO:0015977
Accr13g00811 966 PRINTS Phosphoenolpyruvate carboxylase signature 441 461 IPR021135 GO:0006099|GO:0008964|GO:0015977
Accr13g00811 966 PRINTS Phosphoenolpyruvate carboxylase signature 764 790 IPR021135 GO:0006099|GO:0008964|GO:0015977
Accr13g00811 966 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 169 180 IPR018129 -
Accr13g00811 966 Hamap Phosphoenolpyruvate carboxylase [ppc]. 23 966 IPR022805 GO:0006099|GO:0008964|GO:0015977
Accr13g00811 966 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 5 966 IPR021135 GO:0006099|GO:0008964|GO:0015977
Accr13g00811 966 Pfam Phosphoenolpyruvate carboxylase 37 966 IPR021135 GO:0006099|GO:0008964|GO:0015977
Accr13g00811 966 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 33 966 IPR015813 GO:0003824
Accr13g00811 966 Gene3D Phosphoenolpyruvate/pyruvate domain 309 444 - -
Accr13g00811 966 FunFam Phosphoenolpyruvate carboxylase 1 309 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00811 Accr-Chr13 9036504 9040285 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00811 K01595 - gmx:547756 1766.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03091 1 67856039 67860482 Accr13g00811 13 9036504 9040285 CCT
Accr13g00811 13 9036504 9040285 Accr13g00811 13 9036504 9040285 ECH