Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00721 ATGGTGGCCGGAAATGGTCTGTTTTACCCTATTCTTGGTTTTGTTTCCTGTGTGGTTTTCATATACATGTCTTTTGGAGACTTGAGGCCGAGTTCAAGGGAAGAAGCGACGTTGTCTTTTGTGAAGAGAAATGAGACTCAGTTAATGTTAGATGGCAGACCTTTCTACATCAATGGTTGGAACTCTTACTGGTTTATGGTTCATTCTGTGGACGAATCTTCCAGACCCAGGGTTCGTGCGATGCTTCAAGCTGGTGCGAAGATGGGTCTCACTGTTTGTAGAACTTGGGCTTTTAATGATGGCGACTACAATGCCCTTCAGATTTCCCCTGGTCGGTTCGATGAGCGAGTTTTCCAGGCCTTGGATTATGTCATAGCAGAAGCAAGGCAACAAGGAATTCGGCTGCTGCTTGCCTTGGTCAATAACTTGCATGCCTATGGTGGGAAGACCCAGTATGTGAAATGGGCATGGGAAGAAGGGATAGGGTTAAGCTCATCCAATGATTCTTTCTTTTATGATCCATCAATCCGCAGTTATTTCAAGAATTATGTTAAGACTGTTCTGACAAGGAAGAATACTATCACTGGAGTTGAATATAGAAATGATCCCACTATATTAGGCTGGGAAATAATTAATGAACCTCGTTGCATGACTGATCCATCTGGTGACACTCTCCAAGACTGGCTAGAAGAAATGTCTGCTTTTGTCAAATTGACAGACAAGAACCATTTGGTGACTATTGGCCTTGAAGGATTTTATGGTCCCAACGACCCAAAAGGCCATACTGTAAACCCGGAGGAGTGGGCATCCAGGCTTGGATCTGACTTTATTCGCAATTCTGGGATTGCAAATATCGATTTCACCTCTGTTCATATCTATCCTGACCATTGGTTAAAGACATATGACTTTGAAGTGAACCTGCGTTTTGTCACCAAGTGGATGCATTCACACATCGAAGATGGCGGCAAAGTATTGAAGAAGCCTGTTCTGTTCTCTGAATATGGGTGGTCAGACTTGATCAAGAACTTTTCGGTATCAGACCGTGAAAGGATGTACAGAACAATTCTTGACATAATCTACAAATCTGCTAAGAAAAACAGGTCCGGGGCAGGTGCCTTAGTATGGCAATTCTTAGGAGAAGGAATGAATGAGTTCGAGGATGATTTCTGGATGATCCCATGGAAAGGATCATCAACTTATTTTCTATTTCTTCAACAATCATGCCGATTGGCCAAAGTCACAGGATGGAGTACTCAACAGGACAGAAGTTTCACAGATGCATGTAAGAAAATTTGA 1296 0.4275 MVAGNGLFYPILGFVSCVVFIYMSFGDLRPSSREEATLSFVKRNETQLMLDGRPFYINGWNSYWFMVHSVDESSRPRVRAMLQAGAKMGLTVCRTWAFNDGDYNALQISPGRFDERVFQALDYVIAEARQQGIRLLLALVNNLHAYGGKTQYVKWAWEEGIGLSSSNDSFFYDPSIRSYFKNYVKTVLTRKNTITGVEYRNDPTILGWEIINEPRCMTDPSGDTLQDWLEEMSAFVKLTDKNHLVTIGLEGFYGPNDPKGHTVNPEEWASRLGSDFIRNSGIANIDFTSVHIYPDHWLKTYDFEVNLRFVTKWMHSHIEDGGKVLKKPVLFSEYGWSDLIKNFSVSDRERMYRTILDIIYKSAKKNRSGAGALVWQFLGEGMNEFEDDFWMIPWKGSSTYFLFLQQSCRLAKVTGWSTQQDRSFTDACKKI 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00721 431 FunFam Mannan endo-1,4-beta-mannosidase 6 37 414 - -
Accr13g00721 431 Gene3D Glycosidases 37 414 - -
Accr13g00721 431 SUPERFAMILY (Trans)glycosidases 39 404 IPR017853 -
Accr13g00721 431 PANTHER - 10 421 IPR045053 GO:0004553
Accr13g00721 431 ProSitePatterns Glycosyl hydrolases family 5 signature. 206 215 IPR018087 GO:0004553|GO:0005975
Accr13g00721 431 Pfam Cellulase (glycosyl hydrolase family 5) 58 376 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00721 Accr-Chr13 7991641 7995350 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00721 3 415 Glycoside Hydrolase AT2G20680 69.007 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00721 K19355 - gmx:100811461 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00721 13 7991641 7995350 Accr13g00721 13 7991641 7995350 ECH