Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00674 ATGGCTGATCAAGAAAGCAATGGCATTGGGGTTGCTGACACCTTCGCTCTGGTGCTCGAGGACTGTTCCTTCGACGGGTTGGATCGAAGTCCTGTTGTTTCTAATGACGTGAGGAAGGTGGAGGAGAGAGTTGAGCGTGAAAATTTGGGGATTTCGAGTTGTATGGTTGAGCAAGAAATGAGGAACGGTGCTGAGGCAATCGCTGTGGAATCTACTCGTGTCTTGAAAGTGGACGGAGAAGCGTGTGAAAGTTTGGGGGTTTCGGGTTGTAATATTGAGAAAGGTTTAGGAAGTATTAATTTAGATGATGGGCTTCATAGTTCTGAGCAGGAAATGAGAAACGGTGCCGAGCCAATTACTGTTGAATCTACTTCTACCGCGAAAGTGGATGGTGAAGTGCGTCAAAAATTGGGGGCTTCGAGTTGTAACAGTAATATTGAGGAAGGTGTGGGAAGTATTAGTTCGGTTAGTGGGCTTGGAAGCTCTGTTATAATTGGAAACAATGATGGGAAGAGTGAGATAAAGATGGATGAGAGTGAGAGTGAAAGTTCAGAGTCCGAGAGCGATAATCCATCTTCACCAACATCTGCATCATCTGGTAGTAGCGGTGATAGTGACGACTGTTCAACTAGTGGTGGTTCGAGTGACGATGACGATAGTGATGAAGAAGAAAAAATGACAAAACAGATTGAAGTGGAAGCTGAAGAAGGTGAGATAGAAGACTCTGGTGGGCAAGAGCTGGGTGACACTGCCGCCAGTGATGATGAAGATGCAGGGGAGGTTTCCTGGAGTGGCATTAATGATGAAGATGACATTGCTATGGAAGGACCCATCAGGTCAAAGAACGAGCTCGAGGATCTTCCTTCAGTTCCTCCAGTAAACGTGACCTTAGAACCACACCATCAAATGCTGCCAGTAGGAGTTGTTTTGTCGATTGTCGGCACCCAAGTCATTGTGGAAGGGACGGAGAAGCACGATCCTCTTAATGATGGCTCCATTCTCTGGATAACTGAAACCCGAACACCGCTAGGGTTGGTTGATGAAATATTTGGACCTGTCAAAAACCCCTACTATACTGTGAGATACAATTCTGAAAATGAAATCCCCAAGGGTGTCCGTGTGGGTACTTTGATATCTTTTGTTGTGGAATTTGCCGATCATGTTCTTAACAACAAGGACCTTTACAAGAAAGGCTATGATGCTTCTGGTTTGAATGATGAAGAGGTGTCTGATGAAGCAGAGTTTTCCGATGATGAGAAAGAGGCAGAATATAGGAAAATGCACAAAATGATGAAGAGAGGCATGAGTGATAAGAATCATGGAAAGCAGTCAAAGCATAAAAACAACAGAGAGATGGCTTCCAGGAACAGTGGCCCGGCGGCACCTCCCTTCCCTGTCCCATCTTCTTCAACGCAAAATCATGAAAAGTTTCCTCCATTTTCAGGCATCAGACCAGGTCCTTTCATGGTTCCACCTTTTCCGCCTCCAAACCCCGGCCCTAATTTATCTCCAAACGGAGTATGGACAAATGGGATGTCACTCATGCAGCCACAAACTGGTCTGCTTCCTAATGGATTTCTTCCTAATGGCATATCTTTGTTCCCAGGAAATGGGCAAAATCCTTACCAGTTGCCAATGACAGGACTTCCATTTCAACCGCCACTTCCAGGAACCAATACATTTGCACAACCTATGTTCTACCCACAGGGGCTTCTTGGTGCACATCCAATGAACTTTGGGATGAACTTCCCTCAGATTCAAGCATCTGTAAACGGGGGTGGACAACAAGGTTCTTCACCGTACGGAATGCAACGAGAAAGAAATCATAATTTCCAGTCAGGTCCTGACAATCTCCATGCTCCCAATCAAATTAGACCCGGTGGCTCTGCTAATCGTGGAAGGAGAAACTTTCATCAAAGGGGAAGGAAGAGCTGGCGACCGACGAAGTGA 1950 0.4579 MADQESNGIGVADTFALVLEDCSFDGLDRSPVVSNDVRKVEERVERENLGISSCMVEQEMRNGAEAIAVESTRVLKVDGEACESLGVSGCNIEKGLGSINLDDGLHSSEQEMRNGAEPITVESTSTAKVDGEVRQKLGASSCNSNIEEGVGSISSVSGLGSSVIIGNNDGKSEIKMDESESESSESESDNPSSPTSASSGSSGDSDDCSTSGGSSDDDDSDEEEKMTKQIEVEAEEGEIEDSGGQELGDTAASDDEDAGEVSWSGINDEDDIAMEGPIRSKNELEDLPSVPPVNVTLEPHHQMLPVGVVLSIVGTQVIVEGTEKHDPLNDGSILWITETRTPLGLVDEIFGPVKNPYYTVRYNSENEIPKGVRVGTLISFVVEFADHVLNNKDLYKKGYDASGLNDEEVSDEAEFSDDEKEAEYRKMHKMMKRGMSDKNHGKQSKHKNNREMASRNSGPAAPPFPVPSSSTQNHEKFPPFSGIRPGPFMVPPFPPPNPGPNLSPNGVWTNGMSLMQPQTGLLPNGFLPNGISLFPGNGQNPYQLPMTGLPFQPPLPGTNTFAQPMFYPQGLLGAHPMNFGMNFPQIQASVNGGGQQGSSPYGMQRERNHNFQSGPDNLHAPNQIRPGGSANRGRRNFHQRGRKSWRPTK 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00674 649 Gene3D Probable tRNA pseudouridine synthase domain 275 382 IPR038664 -
Accr13g00674 649 MobiDBLite consensus disorder prediction 588 619 - -
Accr13g00674 649 SUPERFAMILY Translation proteins 303 370 IPR009000 -
Accr13g00674 649 MobiDBLite consensus disorder prediction 151 168 - -
Accr13g00674 649 MobiDBLite consensus disorder prediction 431 452 - -
Accr13g00674 649 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 90 597 IPR040309 GO:0000493|GO:0003723|GO:0005732|GO:0042254
Accr13g00674 649 MobiDBLite consensus disorder prediction 431 499 - -
Accr13g00674 649 FunFam H/ACA ribonucleoprotein complex non-core subunit NAF1 275 381 - -
Accr13g00674 649 MobiDBLite consensus disorder prediction 588 649 - -
Accr13g00674 649 MobiDBLite consensus disorder prediction 186 210 - -
Accr13g00674 649 MobiDBLite consensus disorder prediction 635 649 - -
Accr13g00674 649 MobiDBLite consensus disorder prediction 484 499 - -
Accr13g00674 649 MobiDBLite consensus disorder prediction 151 263 - -
Accr13g00674 649 Pfam Gar1/Naf1 RNA binding region 304 384 IPR007504 GO:0001522|GO:0042254
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00674 Accr-Chr13 7460150 7462967 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00674 K14763 - gmx:102661630 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00674 13 7460150 7462967 Accr13g00674 13 7460150 7462967 ECH