Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00603 ATGGAAGATTTCTGTGATCTTGAAGTGGATATAAACGGACAAGAGACCTTCCTGGTGAACAAAAATCTTGTTGCTCGCTATTCAGGCAAATTCATCAAATTGTTTGGAAAAAATAGCAATCCCAATAGGAAGCTTAAAGTAATATTCCATGACTTTCCAGGAGGGGCATCAGGTTTTGAGCTTGTATTGAGATATTGTTACAACAATGGAAAATATGACATAACTCCTTGCAATCTGTTCCTGGCTCACTCTGCTGCAAAATTCTTAGAAATGAAAGAGTCCGTTGTTGTTGGAAAGAGTCCTAATTTGTTGGAGCAAACAGAAAAATCACTCCAAGAGATTGGCTATTGGACATGGTCTGACCTTTTAAAAGCCTTGAAAAAGTGCCAAGATTTCGCGTTAGTCGCAGGTTGTTCTACCATGATGCTTGAAAAATGCTTGGAATCCATAGTTGGGAGGCTGGTTTTGGCCAGCGAAGCAAGCCCATGTCCATCTTCTTGTTCCTCTGACATTTCTGGGGATCGATGTTCCAGCGAGTCCAAAAGCACAGAGAGCACAAAGACTCTATTTTCTCGTTCCACATGGTGGTTTGAAGACCTCCTATTTCTCAGTCCCTTGCTGGTTCAAATGCTGGTAAAGTCTATGCTTTGGCGAAAACTGGACCATGTTATAATCAGTAGGTTTCTGATGTATTACCAGAAGGCAAAGTTTTCTTCTGCCACAACCGATGAGAAGAGGAAGATCATTGAAATGGTCATAGACATGCATTACAGTATGGAACCTAGTGTTCTTCCTTGCAAGACTTTATTTGGGATTTTCCGAATCACTCTTAACTTGAACATAAGCAAATTTAGAAAGAACAAGTTGGAGAATATGATTGGCGCACAGTTGGATCAAGCAACATTGGATAATTTGCTTGTTCCATCTCCTTATGGAATAGACTACTTGTACGACGTGAATCTTGTCCTGAGATTCTTGAAAGCATTCCTGCGACAAGGAAACTGTCTTGTCGCTCATTCTCGGATGAAGAAAGTTGCCAGCTTTATTGATTTGTATATAGCTGAAATAGCTCCTGATCCTTATTTAAAACCTTCCAAGTTCTTGGCTCTTGTCTTAGCACTACCAGATTCTGCAAGAGACTCCTATGATGAACTGTATCATGCAATGGACATGTATCTTGAGGTGCATGGGGATTTGTCAGAGGAAGAAAGGCTGAAGATCTGTGGTGCTTTAAATTATGAGAAGCTTTCAGCTGAGGCATGCTTGAATCTGTCTCAGAACAAAAAATTCCCATCAAAATCTGCGGTTAAGGCTCTTTTTGTTCAACAGTCCAAGCTCAAAAACTTGATTCTCGGCACTCCGAATAATAATGCTGCAGCTTCAATCACCATTTCGCCGCGTAGTTCCAGCGACGCCGGAAGAAGAGGAACGAGACACAGAATCAAAGAAGAGGTCATGCCGTATACTACAGAGTTTAATGTTTCAGCCCAAGACAAGAGATTCTCAGCAAACTTGCAGGGAATGCAATGGAGGGTCACAGAATTGGAGGGCATGTGTAGGAAATTGCAAGCCCAGATGGCAAAGATCATGAAATCAAGAGTTTCAGGACATAGTTATTCAAGGTCTTTGCCCAAACTCTGTTCTTGA 1647 0.4135 MEDFCDLEVDINGQETFLVNKNLVARYSGKFIKLFGKNSNPNRKLKVIFHDFPGGASGFELVLRYCYNNGKYDITPCNLFLAHSAAKFLEMKESVVVGKSPNLLEQTEKSLQEIGYWTWSDLLKALKKCQDFALVAGCSTMMLEKCLESIVGRLVLASEASPCPSSCSSDISGDRCSSESKSTESTKTLFSRSTWWFEDLLFLSPLLVQMLVKSMLWRKLDHVIISRFLMYYQKAKFSSATTDEKRKIIEMVIDMHYSMEPSVLPCKTLFGIFRITLNLNISKFRKNKLENMIGAQLDQATLDNLLVPSPYGIDYLYDVNLVLRFLKAFLRQGNCLVAHSRMKKVASFIDLYIAEIAPDPYLKPSKFLALVLALPDSARDSYDELYHAMDMYLEVHGDLSEEERLKICGALNYEKLSAEACLNLSQNKKFPSKSAVKALFVQQSKLKNLILGTPNNNAAASITISPRSSSDAGRRGTRHRIKEEVMPYTTEFNVSAQDKRFSANLQGMQWRVTELEGMCRKLQAQMAKIMKSRVSGHSYSRSLPKLCS 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00603 548 Gene3D Potassium Channel Kv1.1; Chain A 1 113 IPR011333 -
Accr13g00603 548 SUPERFAMILY POZ domain 2 93 IPR011333 -
Accr13g00603 548 PANTHER OS12G0117600 PROTEIN 6 523 IPR043454 -
Accr13g00603 548 ProSiteProfiles NPH3 domain profile. 194 445 IPR027356 -
Accr13g00603 548 Pfam NPH3 family 194 421 IPR027356 -
Accr13g00603 548 ProSiteProfiles BTB domain profile. 5 69 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00603 Accr-Chr13 6453492 6456074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00603 17 546 EF-hand Containing Proteins AT3G44820 28.381 3.50e-56 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00603 - - gmx:100784792 702.975