Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00576 ATGGCTGCATCTCTTTCTGCGCCTTCCTTGATAATGGAGGAGGAAGCAAGGTTTGAAGCTGAAGTAGCAGAGGTGCAAGCATGGTGGAACTCAGAGAGGTTCAGACAAACACGGCGACCGTATTCGGCGAGGGACGTCGTGGCACTGCGAGGCAACCTCAGACAAACCTATGCGTCCGACGAGATGGCAAAGAAGCTATGGGGAACCCTCAAGACCCACCAAGCCAACGGCACAGCCTCAAGGACCTTCGGTGCACTCGACCCTGTTCAAGTCACCCAAATGGCTAGCCACTTGGATACCATCTACGTCTCCGGCTGGCAATGCTCCTCCACCGCCGCCACCTCCAATGAACCCGGCCCCGACCTCGCCGATTACCCTTACGATACCGTCCCCAACAAGGTTGAACACCTGTTCTTTGCCCAGCAATTCCATGACCGGAAACAGAAAGAGGAAAGAATGAGAATGAGCAGAGAAGAGAGAGCCAAAACCCCTTACGTTGATTACTTGAGACCCATCATAGCCGACGGCGATACTGGTTTTGGCGGCACTACAGCTACCGTCAAGCTCTGCAAGCTTTTTGTTGAACGTGGTGCTGCTGGTGTCCACATCGAAGATCAATCCTCTGTGACCAAAAAATGTGGTCACATGGCCGGAAAAGTTCTAGTAGCCATTAGTGAACACGTCAATAGGCTCGTGGCAGCGAGGCTACAATTTGATGTTATGGGAGTGGAAACAGTACTTGTGGCTCGAACTGATGCAGAAGCAGCTAATCTGATTCAGTCTAATATAGACACAAGGGACCATCAATTTATATTGGGTGTGACTAATCCAAGCCTGAGAGATAAAAGCTTGGCCGCTCTAATGGCAGTGAATATGGCTGCAGGGAAAAGCGGACCAGAGCTTCAAGCTATTGAAGATCACTGGCTATCAATAGCAAAGTTGAAAACTTTTTCTGAGGCAGTTGAGGATGCAATTAAGAGCATGAACATAGGGGAAGAAGATAAGAAAAGGAGGTTAAATGAATGGATGAAATATTCAAGTTATGAGAAGTGTTTGTCTAATGAGGAAGGAAGGGTGATTGCTGAGAGATTGGGAGTGAGAAATCTGTTCTGGGATTGGGACTTGCCAAGAACAAGAGAAGGGTTTTACAGATTCAAAGGGTCTGTTAAAGCAGCAATTGTACGTGGATGGTCTTTTGCACCACATGCTGATTTGTTATGGATGGAAACAAAAGGTCCCAATTTGGTTGAGTGTACTGAATTTGCTGAAGGAGTTAAGTCCAGGTACCCAGAGATGATGCTGGGTTATAATCTTTCTCCATCGTTTAACTGGGATGCTTCTGGTATGAGTGATGAACAAATGATTGAGTTCATACCCAGAATTGCAAAGTTGGGTTATGTGTGGCAGTTCATAACAGTGGGTGGTTTACACTCAAATGCACTAATTACTTCAACATTTGCAAGGGATTTTGCAAACAGGGGAATGCTGGCTTATGTGGAGAAGATTCAAAGAGAGGAGAGGAATAATGGGGTTGATACGCTTGCTCATCAGAAATGGGCAGGTGCTAATTATTATGATAAGTACCTCAAGACTGTTCAGGGAGGTGTGGCTTCAACTGCTGCAATGGGCAAAGGAGTGACTGAAGAACAATTCAAGCAAACTTGGACTAGGCCTGGAACTGTGGATGTGGGTGGAGGAGGGACTACGGTCGTCGCCAAGTCCAGAATGTAG 1731 0.4702 MAASLSAPSLIMEEEARFEAEVAEVQAWWNSERFRQTRRPYSARDVVALRGNLRQTYASDEMAKKLWGTLKTHQANGTASRTFGALDPVQVTQMASHLDTIYVSGWQCSSTAATSNEPGPDLADYPYDTVPNKVEHLFFAQQFHDRKQKEERMRMSREERAKTPYVDYLRPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHVNRLVAARLQFDVMGVETVLVARTDAEAANLIQSNIDTRDHQFILGVTNPSLRDKSLAALMAVNMAAGKSGPELQAIEDHWLSIAKLKTFSEAVEDAIKSMNIGEEDKKRRLNEWMKYSSYEKCLSNEEGRVIAERLGVRNLFWDWDLPRTREGFYRFKGSVKAAIVRGWSFAPHADLLWMETKGPNLVECTEFAEGVKSRYPEMMLGYNLSPSFNWDASGMSDEQMIEFIPRIAKLGYVWQFITVGGLHSNALITSTFARDFANRGMLAYVEKIQREERNNGVDTLAHQKWAGANYYDKYLKTVQGGVASTAAMGKGVTEEQFKQTWTRPGTVDVGGGGTTVVAKSRM 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00576 576 PANTHER ISOCITRATE LYASE/MALATE SYNTHASE 12 556 IPR006254 GO:0004451|GO:0019752
Accr13g00576 576 CDD ICL_PEPM 75 257 IPR039556 GO:0003824
Accr13g00576 576 Gene3D - 17 535 IPR040442 -
Accr13g00576 576 PIRSF ICL 12 323 IPR006254 GO:0004451|GO:0019752
Accr13g00576 576 PIRSF ICL 368 554 IPR006254 GO:0004451|GO:0019752
Accr13g00576 576 ProSitePatterns Isocitrate lyase signature. 211 216 IPR018523 GO:0003824
Accr13g00576 576 Pfam Isocitrate lyase family 21 551 IPR006254 GO:0004451|GO:0019752
Accr13g00576 576 FunFam Isocitrate lyase 262 377 - -
Accr13g00576 576 NCBIfam isocitrate lyase 22 551 IPR006254 GO:0004451|GO:0019752
Accr13g00576 576 Gene3D - 262 377 - -
Accr13g00576 576 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 11 535 IPR015813 GO:0003824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00576 K01637 - gmx:100782793 992.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00576 13 6235137 6239066 Accr13g00576 13 6235137 6239066 ECH