Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00567 ATGGTTAAGGTTTGCCGGAAAATCTCCCATATCACCCTTAGCAATCGGATTCAACACCGCATTTCCGGTCTCCGCCGACGCATTTTCCGCCTTCTCCACCACTTCTTGCCCTGTTCCGGAGGGAAGCCTTCCAAGTACCTCATGCTACCGCATTTCGCCGAGCCTTCTCCGCCGTCGCAGCCGCCTCCCTCCGTCGTTGAGGCTACTCAAGACGAATCGGTCCAGGTCTCGCCATGTCAATTTCACACGCCCGATTCGGACTCCGATTTGGTTGCTCTCAAGATCAGCCTTCTGGGTGACTGCCAAATAGGAAAAACCAGTTTTCTGGAGAAATATATAGGGAATGAACAAGAACAGGGAAGCCCGGAGAAGAAGGGATTGAATCAGATGGACAAAACTTTAGTCGTTGAAGGGGCACGTCTATCGTATTGTATCTGGGAAGTAGAAGGAAATGGAAGATCACAGGAACATATTCCACTGGCCTGTAAGGACTCCGTTGCAATCTTGTACATGTTTGATCTAACAAGCCGATGTACGTTAAACAGTGTGATTGGGTGGTACAAAGAATCAAGGAAATGGAATCAGACTGCAATTCCGGTGATGATTGGAACCAAGTTTGATGATTTCATTCAACTTCCCTTGGATTTGCAATGGACCATCGCCAGTGAGGCAAGAAGATACTCCAAGGCCATAAATGCAACACTCTTTTTTTCCAGTGCTTCCTACAACATCAACGTCAACAAGATTTTCAAGTTCATCACAGCCAAACTCTTCGACCTGCCATGGACACTGGAACGAAATCTAACTGTTGGTGAACCCATCATAGATTTCTAG 834 0.4712 MVKVCRKISHITLSNRIQHRISGLRRRIFRLLHHFLPCSGGKPSKYLMLPHFAEPSPPSQPPPSVVEATQDESVQVSPCQFHTPDSDSDLVALKISLLGDCQIGKTSFLEKYIGNEQEQGSPEKKGLNQMDKTLVVEGARLSYCIWEVEGNGRSQEHIPLACKDSVAILYMFDLTSRCTLNSVIGWYKESRKWNQTAIPVMIGTKFDDFIQLPLDLQWTIASEARRYSKAINATLFFSSASYNINVNKIFKFITAKLFDLPWTLERNLTVGEPIIDF 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00567 277 Gene3D - 84 266 IPR027417 -
Accr13g00567 277 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 269 IPR027417 -
Accr13g00567 277 ProSiteProfiles small GTPase Rab1 family profile. 87 277 - -
Accr13g00567 277 Pfam Ras family 94 257 IPR001806 GO:0003924|GO:0005525
Accr13g00567 277 SMART rab_sub_5 93 260 - -
Accr13g00567 277 FunFam Septum-promoting GTP-binding protein 1 83 267 - -
Accr13g00567 277 PRINTS Transforming protein P21 ras signature 93 114 - -
Accr13g00567 277 PRINTS Transforming protein P21 ras signature 195 208 - -
Accr13g00567 277 PRINTS Transforming protein P21 ras signature 235 257 - -
Accr13g00567 277 PRINTS Transforming protein P21 ras signature 134 156 - -
Accr13g00567 277 PANTHER - 90 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00567 Accr-Chr13 6161718 6163763 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00567 K07976 - gmx:100792211 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00567 13 6161718 6163763 Accr13g00567 13 6161718 6163763 ECH