Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00554 ATGACTAAGGCTTCATTCAAGATGGAACACCCCCTTGAAAGGAGGCAGGCGGAATCTGCTCGCATCAGAGAAAAGTATCCTGATAGAATACCTGTGATCGTTGAAAGGGCTGAAAAGAGTGATGTTCCTGAAATTGATAAGAAAAAGTATCTGGTTCCTGCTGATCTGACCGTTGGACAGTTTGTGTATGTTGTGAGAAAGAGAATCAAGCTGAATCCTGAGAAGGCCATCTTTATCTTCGTCAAGAACATTTTACCTCCGACTGCTGCTATGATGTCTGCAATTTACGAGGAATATAAGGATGAAGATGGGTTCCTGTACATGACTTACAGTGGAGAAAACACGTTCGGGACGATGGAATAA 363 0.427 MTKASFKMEHPLERRQAESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLNPEKAIFIFVKNILPPTAAMMSAIYEEYKDEDGFLYMTYSGENTFGTME 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00554 120 FunFam Autophagy-related protein 1 117 - -
Accr13g00554 120 SUPERFAMILY Ubiquitin-like 3 117 IPR029071 -
Accr13g00554 120 MobiDBLite consensus disorder prediction 1 20 - -
Accr13g00554 120 CDD Ubl_ATG8 12 114 - -
Accr13g00554 120 Pfam Autophagy protein Atg8 ubiquitin like 14 117 IPR004241 -
Accr13g00554 120 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 1 117 IPR004241 -
Accr13g00554 120 Gene3D - 1 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00554 Accr-Chr13 5902675 5904468 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00554 K08341 - qsa:O6P43_028671 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00554 13 5902675 5904468 Accr13g00554 13 5902675 5904468 ECH