Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00542 ATGAAGACATATTCTAGCACTAATACTGTTTCTCCTTGCCAATTTCTAGAGGCTGCTCACCATGTTGCCACTTGTGACTATGAATATGGCACTGCTTGGGGTAATCAGGTGGGGTGGTTATATGGATGGTTGTCAGAGGATGTGTTAACAGGGTTAATCATCCATAGGAGAGGTTGGAAGTCAGAGTGTTGCACACCTGAGCCTATTGCTTTCACAGGCTGCGCCCCCGGAGGGTCCATATCCACGATGACCCAACAAAAGATATGGGCTTCAGGCCTGCTTGTTAACTTATTGGGCCCCCAAAGTCCTGTTTTGGGATTCCTCTTCGGTAAGATCCAATTTAGGCAGGTCTTGGCCTACATGTGGATCACGAATTGGGCCCTCCGATCTGTTCCTGAATTATGTTATGCTCTTTTGCCTCCATATTGCATCATAACCAACTCCACTTTCTTATCCAAGGGACCTTGTGTATGGATTCTAGTTTCTCTGTTCGTGGTTTACAATGTATACACTCTAATAGAGTACAAGGCAATTGGGCAATCAACTCGAGCATGGTGGAATAACCAGAGAATGAAAAGAATAACGACAACTACGGCCTGGTTTCTGGGTTTTGTGAGCGCCATGGTGAAGTTGGTTGGGATTTATGATACAGTCTTTGAGATAACACAAAAGGAGCCCCCAAGCGATAGTGATTCTAATAATGATTTAGAGAATGCTGGTATGTTCAGCTTCGACGAGTCTCCAGTGTTCATGGTGGGAACCACTATTTTGATGGTTCAACTCACAGCTCTGGGTATGAAATTATGGAATTTGTTAGGAGGATCATTGAAGGATGAGAGTGGGAATGGAGAGGTGTTTTGTTGTGCCTACATGGTGGTGTGCTATTGGCCTTTTCTTGACGGATTGTTTGGAAAAGGAAACCATGGAATCCCCTCATCCACAATTCTCAAGTCTGCAACTATGACCTTGCTCTTTCTCCTCTTTTGTACTTGA 993 0.4441 MKTYSSTNTVSPCQFLEAAHHVATCDYEYGTAWGNQVGWLYGWLSEDVLTGLIIHRRGWKSECCTPEPIAFTGCAPGGSISTMTQQKIWASGLLVNLLGPQSPVLGFLFGKIQFRQVLAYMWITNWALRSVPELCYALLPPYCIITNSTFLSKGPCVWILVSLFVVYNVYTLIEYKAIGQSTRAWWNNQRMKRITTTTAWFLGFVSAMVKLVGIYDTVFEITQKEPPSDSDSNNDLENAGMFSFDESPVFMVGTTILMVQLTALGMKLWNLLGGSLKDESGNGEVFCCAYMVVCYWPFLDGLFGKGNHGIPSSTILKSATMTLLFLLFCT 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00542 330 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 16 316 - -
Accr13g00542 330 Pfam Cellulose synthase 8 325 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00542 Accr-Chr13 5692811 5694172 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00542 16 328 Glycosyltransferase AT2G32540 40.798 6.43e-76 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00542 - - gmx:100796197 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00542 13 5692811 5694172 Accr13g00542 13 5692811 5694172 ECH