Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00526 ATGACGCTGGTGGGAGCTCTCGCCGTTCTCTTCCTTCTCCTTGCTCTGTACTGTGGGTTTGACCCTTTTGGCCACAGCCCCATTGCCGACTTCCCGGAGTTCGAAGCCCTGAAAGTCGACTTGCCGGCTTGGTCCGATGTCCCCACGGATGCTGACTCTGAAAACTTGTTGCAGAAGTCGGAGATTAAGTTTTTGAATCAAGTTCAGGGACCTGAGAGCATTGCTTTTGATCCTCTTGGTCGTGGGCCTTACACGGGTGTCGCTGATGGCAGAATCTTGTTCTGGAATGGGCACTCTTGGACTGATTTTGCTTACACTTCATCCAACAGGTCAGAAATATGTAATCCTATAGCATCTGCCACACCATTTAGTTATGTGAAGAATGAGCACATCTGTGGAAGACCTTTGGGACTCAGATTTGACAAGAGAACAGGTGATCTATACATCGCAGATGCATACTTCGGGCTAATGAAGGTGGGGCCTGAGGGTGGCTTGGCAACGTCTCTTACAACTGAGGCCGAAGGAGTGCCTCTCAGGTTTACTAACGATGTAGATGTTGATGCAGAAGGAAATGTATATTTCACAGATAGCAGCACTAAATATCCAAGGAGGAATTTCATTCAGCTGGTATTCTCTGGCGAGAATAGTGGCAGGGTTTTGAAATACAACCCCGCCACAGGGGAAACCACTGTTCTTGTCAGGAATGTCCAATTTCCAAATGGCATTTCCTTAAGCAAGGATGGTTCCTTTTTCGTCTTCTGTGAAGCGGCTATTGGCAGGTTACGTAAGTTCTGGCTAAAAGGCAATAAAGCTGGGACCTCAGAGGTGTTGGCCATTCTTCCTGGATTCCCTGACAATGTGAGAGTCAATGAGGATGGAGACTTTTGGGTGGCTATTCATTGTCGAAGGTATATGTACACTTACATAAATGGCCACTATCCACAGCTCAGAAAATTCATACTCAAGCTTCCTATTCCAACAAGGATTCAATACTTACTTCAGATTGGATGGAGGGTCCATGCAATGGTTGTTAAGTATAGCCCTGAGGGTAAGCTTCTGCAGATATTGGAGGATAGTTCAGGAAAAGTTGTTAGAGCTGTGAGTGAAGTGGAAGAGAGGGATGGTAAACTCTGGTTTGGAAGTGTTCTCATGCCTTTTGTTGCAGTTTATGATCTGAAATAA 1182 0.4594 MTLVGALAVLFLLLALYCGFDPFGHSPIADFPEFEALKVDLPAWSDVPTDADSENLLQKSEIKFLNQVQGPESIAFDPLGRGPYTGVADGRILFWNGHSWTDFAYTSSNRSEICNPIASATPFSYVKNEHICGRPLGLRFDKRTGDLYIADAYFGLMKVGPEGGLATSLTTEAEGVPLRFTNDVDVDAEGNVYFTDSSTKYPRRNFIQLVFSGENSGRVLKYNPATGETTVLVRNVQFPNGISLSKDGSFFVFCEAAIGRLRKFWLKGNKAGTSEVLAILPGFPDNVRVNEDGDFWVAIHCRRYMYTYINGHYPQLRKFILKLPIPTRIQYLLQIGWRVHAMVVKYSPEGKLLQILEDSSGKVVRAVSEVEERDGKLWFGSVLMPFVAVYDLK 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00526 393 Pfam Strictosidine synthase-like, N-terminal 57 94 - -
Accr13g00526 393 Gene3D - 52 393 IPR011042 -
Accr13g00526 393 Pfam Strictosidine synthase 182 268 IPR018119 GO:0009058|GO:0016844
Accr13g00526 393 PANTHER STRICTOSIDINE SYNTHASE-RELATED 7 385 - -
Accr13g00526 393 FunFam Putative strictosidine synthase 54 393 - -
Accr13g00526 393 SUPERFAMILY Calcium-dependent phosphotriesterase 48 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00526 Accr-Chr13 5535559 5539654 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00526 - - gmx:100803331 675.241