Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00515 ATGGGAAAGAATCAGAAGTCGGAACTTGGGAGGGCTTTGGTGAGGCAGCACAACCAGATGGTCCAGCAGAGCAAGGAAAAGGGTCGTTTCTACAGGAATCAGCAGAAGAAGATTTTGGAATCGGTTACAGAGGTCACTGACATTGATGCCATCATTGAACAAGCCGACGAGGCCGAGCGTCTCTTCGTGGCCAACCAGTCTGCCCCTGACCTCCCCATTCGTCTGGATACAGGCTCTAGCACTAGTGAAATGACGCCTGAAGAGAGGAGAGATCTTCAGAAGAGAGAGGAGGCGCTGCATGCTGGCAGTCTCCGAGTTCCACGCAGGCCGCCATGGAGTGTGAACATGTCCGTGGAGGAGCTTGATGCCAATGAAAGACAAGCTTTCTTGACTTGGCGTCGCAGTCTAGTGAGACTCGAGGAAAATGAGAAGCTTGTCCTTACACCCTTTGAGAAGAATCTTGATATTTGGAGACAGCTTTGGCGAGTCCTTGAGCGTAGTGATTTGCTTGTGATGGTTGTTGATTCGCGAGATCCGCTTTTTTACCGCTGTCCTGATCTTGAGGCATATGCAAGAGAGGTAGATGAGCATAAACGGACATTGCTGCTGGTTAACAAGGCTGATCTTTTGCCCACACCTATTAGAGAGAAATGGGCAGAGTACTTCCGGGCTCATGATATTCTCTTCATCTTCTGGTCAGCTAAAGCTGCTACTGCTGCTCTGGAAGGAAAAAAGCTTCCTTCATCATCAGGTGCTGAAAATTTGAAGAAGTCCTGTAACCCAGATATAAAAATATATGGTAGAGATGAGCTCCTGGCTCGGTTACAGTCAGAAGCAGAAGAGATTGTAGAGAGGAGGAGAAAATCAAGCTCCTCTGACACAGGGCCTTCTGATATTCAATCTCGTAGTGAAAATACTTCCTCTACCTCGTCATCAAGTAATGTCGTTGTGGGATTTGTTGGTTATCCTAATGTGGGTAAAAGTTCAACCATCAATGCTTTGGTAGGCCAAAAACGGACAGGTGTCACCTCCACTCCAGGGAAGACAAAGCACTTCCAAACGTTAATTATTTCTGATAGGCTAACCCTTTGTGACTGTCCTGGGTTAGTTTTTCCATCTTTTACAAGCTCAAGATATGAGATGATTGCTTGTGGGGTGCTGCCCATCGATAGAATTACCGAACACCGGGAGGCTGTCCAGGTTGTTGCCGATAAAGTACCTAGACATGTCATTGAGGAAGTTTATAGGATCACCCTTCCAAAGCCTAAGCCATATGAACCCCAATCTAGGCCTCCTCTTGCAGCTGAACTTCTGAGAACTTATTGTGCTTCTCGTGGATATGTGGCCTCTAGTGGGCTACCCGATGAAACTAGAGCTACCCGTCAGATACTGAAAGATTACATTGATGGAAAGTTGCCTCATTATGAATTGCCACCTGGAATGTCGAATGAGGAACAAGCTGTGGCCCAACCCGGAGGACTTGACTCAGTTAACTTGAACAAATCAGATTCTTCCCATATTGAAAATTCTTCAGATGTGGAGAGTGAAGATGCCCCTAAGCTAGGGCACGTACTGGACGATCTCAATTCATTTGACATTGCTAATGACCTTGCTCCAAAGAAAGCTACTGTCAAGAAGTCTAATGCTTCTCACAAACATCATAAGAAGCCTCAGAGGAAAAAAGATCATTCATGGAGAGTAGGAAATGATGATGATGATGGGATGCCAGTTGTCAGATTCTTTCAGAAACCAGTAAATACACGTCCAATGAATGTCTGA 1779 0.4592 MGKNQKSELGRALVRQHNQMVQQSKEKGRFYRNQQKKILESVTEVTDIDAIIEQADEAERLFVANQSAPDLPIRLDTGSSTSEMTPEERRDLQKREEALHAGSLRVPRRPPWSVNMSVEELDANERQAFLTWRRSLVRLEENEKLVLTPFEKNLDIWRQLWRVLERSDLLVMVVDSRDPLFYRCPDLEAYAREVDEHKRTLLLVNKADLLPTPIREKWAEYFRAHDILFIFWSAKAATAALEGKKLPSSSGAENLKKSCNPDIKIYGRDELLARLQSEAEEIVERRRKSSSSDTGPSDIQSRSENTSSTSSSSNVVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISDRLTLCDCPGLVFPSFTSSRYEMIACGVLPIDRITEHREAVQVVADKVPRHVIEEVYRITLPKPKPYEPQSRPPLAAELLRTYCASRGYVASSGLPDETRATRQILKDYIDGKLPHYELPPGMSNEEQAVAQPGGLDSVNLNKSDSSHIENSSDVESEDAPKLGHVLDDLNSFDIANDLAPKKATVKKSNASHKHHKKPQRKKDHSWRVGNDDDDGMPVVRFFQKPVNTRPMNV 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00515 592 MobiDBLite consensus disorder prediction 545 562 - -
Accr13g00515 592 PRINTS GTP1/OBG GTP-binding protein family signature 363 378 IPR006073 GO:0005525
Accr13g00515 592 PRINTS GTP1/OBG GTP-binding protein family signature 317 337 IPR006073 GO:0005525
Accr13g00515 592 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 157 372 IPR030378 GO:0005525
Accr13g00515 592 MobiDBLite consensus disorder prediction 492 518 - -
Accr13g00515 592 PANTHER LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED 1 566 IPR043358 GO:0003924
Accr13g00515 592 MobiDBLite consensus disorder prediction 541 576 - -
Accr13g00515 592 MobiDBLite consensus disorder prediction 72 92 - -
Accr13g00515 592 MobiDBLite consensus disorder prediction 283 313 - -
Accr13g00515 592 CDD HSR1_MMR1 156 372 - -
Accr13g00515 592 Pfam 50S ribosome-binding GTPase 317 373 IPR006073 GO:0005525
Accr13g00515 592 FunFam Large subunit GTPase 1 156 373 - -
Accr13g00515 592 MobiDBLite consensus disorder prediction 293 313 - -
Accr13g00515 592 Gene3D - 156 373 IPR027417 -
Accr13g00515 592 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 407 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00515 Accr-Chr13 5420423 5424112 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00515 K14539 - zju:107420851 885.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00515 13 5420423 5424112 Accr13g00515 13 5420423 5424112 ECH