LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr13g00500	ATGTCGGTGAAGGAATGCCCCCACCACCTCGACGACGAGAAACAGCTCGTCCGCCGTGTAGTTGGCGGAGTTGCAGCCTTCATTGTCCTCATCCTCATCGTCATCTTCGTCATCTGGGCCATCCTTCGACCCTCTAAACCTAGCTTCATCCTCCAAGACGCCACCCTCTTCAACTTCAACCTCTCCTCCTCGACGGCCACCGGTGCCTCCGCCATTGAACCTCCTTCTTTGACCCCCAACACAATCACCATCACCATGCAAGTCACGCTCTTGGCTCGCAACCCCAACGACCGAATTGGGATATATTACCAGAAGCTGGACGTGTACGCGTCGTACAGGAACCAACAGATCTCGCTCGGCACCATGCTGCCGGCAACGTACCAGGGACACAAAGACGTGACGGTGTGGTCGCCGTTCTTGTACGGGATGGCGGTCCCGGTGTCGCCGTACGTGTTGCAGTCTCTGGGACAGGATCAGGATGCCGGCGGAGTGCTCGTGAACGTGAAGGTGATGGGAAGGGTGAAATGGAAGGTCGGGTCTTGGTTGTCCGGCAAGTACCATCTCTACGTCAACTGTCCGGCCTATATAAGGCTCGCCGGAGACTGGACCGGAGCTGCAGGCCCCGCCATCAAGTATCAGATTATGCAGAGTTGCAGTGTCGATGTTTAG	669	0.568	MSVKECPHHLDDEKQLVRRVVGGVAAFIVLILIVIFVIWAILRPSKPSFILQDATLFNFNLSSSTATGASAIEPPSLTPNTITITMQVTLLARNPNDRIGIYYQKLDVYASYRNQQISLGTMLPATYQGHKDVTVWSPFLYGMAVPVSPYVLQSLGQDQDAGGVLVNVKVMGRVKWKVGSWLSGKYHLYVNCPAYIRLAGDWTGAAGPAIKYQIMQSCSVDV	222

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr13g00500	222	Pfam	Late embryogenesis abundant protein	89	190	IPR004864	-
	Accr13g00500	222	PANTHER	OS05G0367900 PROTEIN	18	220	IPR044839	GO:0098542

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr13g00500	Accr-Chr13	5078938	5079606	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr13g00500	28	192	EF-hand Containing Proteins	AT5G21130	24.242	2.26e-06	45.4

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr13g00500	-		-	qsa:O6P43_028576	308.145