Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00495 ATGGTCACTGAAGATCTCAAATCGAAGCCTGTCCAGATCCGTGAAGTGTGGGCCTCTAATCTCGAATCTGAATTTCGACTCATCCGTGATTTGATCGATCGCTACCCTTTTATCTCCATGGACACCGAGTTTCCTGGCGTTATCTTTCGCCCTAACGTTGATCCTGCGATTCCTTACCACCACCGCCAGCTTCTTCCCTCCGATCACTATCGCCTCTTGAAGGCTAACGTCGATGCCTTGAATCTTATCCAGGTCGGCCTCACCCTCTCCGATGCTGATGGCAACCTTCCCGACCTTGGATCTGAAAACCGCTTTATCTGGGAGTTTAATTTCTGCGACTTTGACCTGGCGCGTGACGCCTTCGCCTCTGATTCCATCGATTTGCTCCGCCGGCAGGGGATCGACTTCGAGAGAAACGTCGAGGACGGAGTCGACTCCGCGCGGTTCGCGGAGTTGATGATGTCGTCGGGGCTGATCTGCAACGAGTCGGTAAGTTGGGTGACGTTTCACAGCGCGTATGATTTCGGGTACCTGGTGAAGATCCTGACCCGACGGAGCTTGCCGAGTGGGGTGGAGGAATTCTTGAGATTGTTGAGGGTGTTTTTTGGGAACAAAGTTTATGATATCAAGCACATGATGCGCTTCTGCAAGAGCCTGTACGGGGGGTTGGACCGGGTGGCGAGGACCCTCAACGTGAACCGGGCGGTGGGGAAGTGCCATCAAGCCGGGTCAGACAGCTTGCTGACGTGGCATGCGTTTCAGAGAATGAGGGATATTTATTTTGTAAAGGATGGTCCGGAGAATTATGCCGGCGTGTTGTATGGATTAGAAGTGCTGTGTTGA 843 0.5291 MVTEDLKSKPVQIREVWASNLESEFRLIRDLIDRYPFISMDTEFPGVIFRPNVDPAIPYHHRQLLPSDHYRLLKANVDALNLIQVGLTLSDADGNLPDLGSENRFIWEFNFCDFDLARDAFASDSIDLLRRQGIDFERNVEDGVDSARFAELMMSSGLICNESVSWVTFHSAYDFGYLVKILTRRSLPSGVEEFLRLLRVFFGNKVYDIKHMMRFCKSLYGGLDRVARTLNVNRAVGKCHQAGSDSLLTWHAFQRMRDIYFVKDGPENYAGVLYGLEVLC 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00495 280 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 11 277 IPR039637 GO:0004535|GO:0030014
Accr13g00495 280 SUPERFAMILY Ribonuclease H-like 10 276 IPR012337 -
Accr13g00495 280 Gene3D - 2 278 IPR036397 GO:0003676
Accr13g00495 280 Pfam CAF1 family ribonuclease 16 145 IPR006941 -
Accr13g00495 280 FunFam Putative CCR4-associated factor 1 7 3 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00495 Accr-Chr13 5045708 5046550 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00495 K12581 - qsu:112026170 472.241