Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00475 ATGACTCGGATTTTGGTTCCGCGGGGTTCGTCTGGCAATTCTTCTTCAAACCCTAGTCGTTCTTCTTCAACTCGGGCAGAGCCACTCGCAACAGTTCCCCAGGCTCCTTCGACTGTGAAAGATGAGGACAGTGGACAGGAGGTACCAGACCTAGTTGCTGACAACGAGCTTTTGGATTCTTCTGGGAAGAACGACGAACTTTTGGTAGATAATCTTCGTTGTGAGCAGAATGACGCTACAAGTGATGAAATAGCTGACGTTGAGAAAGCTGGTAAGGAGGAGGTAGCAGGTAGGCGAGAATATGACAACAGATTGTGCGGATTGAAAGTTTCGGAAAGACTTGCATCAGGAAATGAGGGTTCAAGCTGTGATTCTTTGCGCAGTGCTAACGTTACTCCAAATCCACCACCTCCTCCTGTTCCTCCTCCAAAACTGTCAGCCTCTAACTTGAATTCGAGGAGAAATGTGTCATCAAATTCAAATGCTGTCCAAATAGGACCATCTCGAAGAGCATCTGCGTGGCCTGTTGTTTCAGCCAGGACTTCACCTGCTGGGTCTCGACCTACTTCCCCTAGGTCTCTTAATGAGAATGAGGGTTACAATAGCGCTGATGAACAGAATCCATGCTTTCCATCCTCTTATGATGATTTAGAGAGAGAGCGGCAATTTGAAATTGATATCAGAAGGGCAAAAGGTTATGAAGTAAAACGAATGATGCAGGATGGAAATTGTCTTTTTCGTGCAGTTGCAGACCAGGTGTATGGGGACTCTGAAGTATATGATTTGGTCCGACAGATGTGCATAGACTATATGGAGCGGGAAAGAGACCACTTTTCTCAATTTGTTACTGAAGGCTTCACATCTTATTGTAAGAGGAAGAGAAGAGACAAGGTCTATGGAAACAATGTTGAGATCCAATCCATGTGTGAGATGTATAACCGTCCCATTCATATATATTCCTATACTATAGAACCTATCAACATCTTTCAGGGAAGCTATGGCACTGATACACCGCCCATACGACTGAGTTATCATCATGGGAATCATTACAATTCCCTTATTGACCCACGACGCTTGACAGTTGGCGCAGGACTTGGGTTTAGCTGCCTTCGTGGGACAAATGTTGACAAAGATCAAGTCAAGGCTGCAATTAAAGCTCAACAGGACCAACAGATTGATAATGCACTTTTAGCGGAGGCACGGTTTTACTCTGATCTCGAGCTTACAGAAAAGGAGATTGAGCACATGGTGATAGAAGCTTCTCGGGCTGAATATCTCGCTGATGCCACATTTAAGCAGCAACCTTCCCATAGAGAATCCTCAACCTCAAACGCTGAGCCTTCATCTTCTGGAGCAAGATCGTCGGGTGGAGAAGGCAAGACGGAGATTGGGAAAGAGCGGGATTCAAATCTAAGCAAAAGCATGCAGATGGTGCTATCCATGGGATTCAGCTACCTGCAGGCGATAGAGGCTTATAGCATATTTGGGGATGATGTGGATTCTATGGTTTGTTACCTCTTGGAAACCAGCAGTAGCAGCAGACGAAAAGGCAAGGCCCCTGAGTGA 1566 0.4566 MTRILVPRGSSGNSSSNPSRSSSTRAEPLATVPQAPSTVKDEDSGQEVPDLVADNELLDSSGKNDELLVDNLRCEQNDATSDEIADVEKAGKEEVAGRREYDNRLCGLKVSERLASGNEGSSCDSLRSANVTPNPPPPPVPPPKLSASNLNSRRNVSSNSNAVQIGPSRRASAWPVVSARTSPAGSRPTSPRSLNENEGYNSADEQNPCFPSSYDDLERERQFEIDIRRAKGYEVKRMMQDGNCLFRAVADQVYGDSEVYDLVRQMCIDYMERERDHFSQFVTEGFTSYCKRKRRDKVYGNNVEIQSMCEMYNRPIHIYSYTIEPINIFQGSYGTDTPPIRLSYHHGNHYNSLIDPRRLTVGAGLGFSCLRGTNVDKDQVKAAIKAQQDQQIDNALLAEARFYSDLELTEKEIEHMVIEASRAEYLADATFKQQPSHRESSTSNAEPSSSGARSSGGEGKTEIGKERDSNLSKSMQMVLSMGFSYLQAIEAYSIFGDDVDSMVCYLLETSSSSRRKGKAPE 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00475 521 SUPERFAMILY Cysteine proteinases 221 356 IPR038765 -
Accr13g00475 521 CDD OTU_plant_OTU6-like 229 355 - -
Accr13g00475 521 Gene3D - 215 366 - -
Accr13g00475 521 Pfam OTU-like cysteine protease 241 350 IPR003323 -
Accr13g00475 521 MobiDBLite consensus disorder prediction 146 167 - -
Accr13g00475 521 MobiDBLite consensus disorder prediction 1 64 - -
Accr13g00475 521 ProSiteProfiles OTU domain profile. 233 356 IPR003323 -
Accr13g00475 521 PANTHER OTU DOMAIN CONTAINING PROTEIN 138 364 - -
Accr13g00475 521 MobiDBLite consensus disorder prediction 115 209 - -
Accr13g00475 521 MobiDBLite consensus disorder prediction 182 209 - -
Accr13g00475 521 MobiDBLite consensus disorder prediction 1 41 - -
Accr13g00475 521 MobiDBLite consensus disorder prediction 115 130 - -
Accr13g00475 521 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 466 509 IPR015940 -
Accr13g00475 521 MobiDBLite consensus disorder prediction 430 469 - -
Accr13g00475 521 FunFam OTU domain-containing protein 5 214 366 - -
Accr13g00475 521 MobiDBLite consensus disorder prediction 131 145 - -
Accr13g00475 521 MobiDBLite consensus disorder prediction 433 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00475 Accr-Chr13 4839621 4843096 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00475 K12655 - cave:132163383 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00475 13 4839621 4843096 Accr13g00475 13 4839621 4843096 ECH