Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00461 ATGGCAGTGAGGGCAACAGTCTCGCGTTTCCCAATTGACCCTGACGCCCAGGAGGGCTCGGGTTTGCCCTGGGGAGTGACGTTGACGCCCTTCGCTGCCAAGGACGAAAACGGCCAACCTCCAGCATATGGATCTGATGGGCACCTCTTGCCCCGATGCGAGAACTGTTGGGCATACTTAAATACCTACTGTGAGCTCGAACAGTGGTCATGGAGTTGCTCACTCTGTGGCACCCTCAATGGCCTCTCATCCACTGCTATTACTCGATACTCTCTCCCACATTCTTGTGCTGAGATGATGTCTTCCTTCATCGATCTTGAATTACCTGAGGAATCATCAGAAGAAGCAGCAGTACAAGCTCGTCCGGTCTATGTTGCTGCTGTTGACTTGTCCTCTTCAGAGGAGTTTCTAGATCTCATTAAAAGCGCCTTGCTGGCAGCTTTGGAAGCTCTAGCTCCTGGTTCACTTTTTGGGCTTGCTACCTTCAGCCACAAATTGGGATTGTATGATGTTCAAGGTCCTATACCTGTTGTGAAAAATGTTTTCATTCCTCCTGATACCGAGGGAACCTTATCAATTGAGCTTGAAGATGTCATGCCTTTGTTACAGTTTTTGGCTCCTGTGGAAACTTGTAAGGAGCGTATTGCATCTGCCCTTGAAACGCTTAGACCAACAAGTTCATGGGAGAGAACCACAGCAGCTGGTCAAGGATTGGATGGTGTTCTGATAGGTGGGCGTGGTTTTGGGGTGGCGATGGAAGCTCTTTTCAATTACCTTGGATCTGAATATGGAAACACGTTTGCGTTAGCTAGAGTTTTTGCCTTCTTGTCTGGTCCTCCTGATTATGGAGCCGGACAATTGGATACAAGAAGATATGGTGAGCAATATGCCAGCAAAGGAGAGGATGCGGACCGTGCCTTACTCCCTGAGCAGACACCATTCTATAAAGATCTGGCTGCTGTTGCTGTTCAAGCAGGCGTCTGTGTGGACATATTTGCTGTAACAAATGAGTACACAGATTTGGCTTCCCTGAAGTTCCTGAGCATTGAAAGTGGGGGTTCTTTACTATTATATACAAGTACTGAGGATTCAACTTTGCCCCAGGACATATTTCGGATGCTTAGTCGGCCATATGCTTTTGGTTGTGTTCTACGATTAAGAACATCAACTGAATTTAAACCTGGCCATTCTTATGGTCATTTTTTCCCAGATCCACAATATGAAAATGTTCAGCACATCATTTGTTGTGACTCTTATGCCACTTATGCTTATGACTTTGAGTTTGATAACAATGTTGGATTTTCAAGGCATGCATCAGAAGTTCCTACGCTTCAGATTGCATTTCAGTACACAGTAGTGGTTCCTCCTGAAGAACTTTCCAGTTCAGGAACAGCTTCTGCTAGTAGAACCAGGCATTCCCTTCAACGTCGATTGAGGATTCGGACCTTACAGTTCCATGCTGCTCAGAACATGAGTGAACTTTATGATGGTGTTGATCCTGAAGTTGTGCTATCTTTGCTTGTTCACAAGGTCATATTAGCTTCTTTGAAGGAAGGAGTTCGGGAGGGCAGGATGTTACTTCAAGATTGGCTAGTGATCCTTACATCCCAGTACAATGAAGCTTATAAACTTGTTCAGTATGGGAGTGGAAGTTCCACAAGTTCTCAGATTGATGTTTCATTCTCCCAATGTCCACAGCTACAGCCTCTTCCCCGCCTAATTTTTGCTCTCCTTCGTAATCCTCTTCTTCGCTTTCATGAGGAAGGTGTTCATCCAGACTACCGTATCTATCTACAATGCCTTTTCAGTGCTCTGGAACCAAATTCCCTTCACCGTGCTGTGTACCCAGTGTTGACTTCATATTCTAGTCCAGATAAACAAGCATACCCACGCCATTCCTTGAGTCGTGCCGCGCTAATTACCAGTGGCAGTCCGATATTTTTCCTTGATGCGTTCACAACTCTGATTGTGTTCTACTCTTCAACTGCAGATCCGTCATTTCCTTTCCCTCCTCCCCATGATTGCTTGTTGAGGACTACAATCAATAAATTGAAGCGAGAGAGATGCATCACTCCCAAGCTCATTTTTATCCGAGGTGGACAGGATGATGCTTCAGTTTTTGAGAACTTTCTGATCGAGGAACAGGATGTTGATGGAAGCGGTCTCACAAGTGTAATGGGTTTTGTTTCCTTCCTTGAAGGTATTACGCGTGATGTGTTAGAATACATTAAATGA 2235 0.4528 MAVRATVSRFPIDPDAQEGSGLPWGVTLTPFAAKDENGQPPAYGSDGHLLPRCENCWAYLNTYCELEQWSWSCSLCGTLNGLSSTAITRYSLPHSCAEMMSSFIDLELPEESSEEAAVQARPVYVAAVDLSSSEEFLDLIKSALLAALEALAPGSLFGLATFSHKLGLYDVQGPIPVVKNVFIPPDTEGTLSIELEDVMPLLQFLAPVETCKERIASALETLRPTSSWERTTAAGQGLDGVLIGGRGFGVAMEALFNYLGSEYGNTFALARVFAFLSGPPDYGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQAGVCVDIFAVTNEYTDLASLKFLSIESGGSLLLYTSTEDSTLPQDIFRMLSRPYAFGCVLRLRTSTEFKPGHSYGHFFPDPQYENVQHIICCDSYATYAYDFEFDNNVGFSRHASEVPTLQIAFQYTVVVPPEELSSSGTASASRTRHSLQRRLRIRTLQFHAAQNMSELYDGVDPEVVLSLLVHKVILASLKEGVREGRMLLQDWLVILTSQYNEAYKLVQYGSGSSTSSQIDVSFSQCPQLQPLPRLIFALLRNPLLRFHEEGVHPDYRIYLQCLFSALEPNSLHRAVYPVLTSYSSPDKQAYPRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPSFPFPPPHDCLLRTTINKLKRERCITPKLIFIRGGQDDASVFENFLIEEQDVDGSGLTSVMGFVSFLEGITRDVLEYIK 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00461 744 SUPERFAMILY vWA-like 122 376 IPR036465 -
Accr13g00461 744 Pfam Sec23/Sec24 zinc finger 51 82 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Accr13g00461 744 PANTHER SEC24-RELATED PROTEIN 3 733 - -
Accr13g00461 744 SUPERFAMILY beta-sandwich domain of Sec23/24 3 497 - -
Accr13g00461 744 Pfam Sec23/Sec24 helical domain 499 611 IPR006900 GO:0006886|GO:0006888|GO:0030127
Accr13g00461 744 Gene3D Sec23/Sec24 helical domain 470 628 - -
Accr13g00461 744 Gene3D von Willebrand factor, type A domain 121 378 IPR036465 -
Accr13g00461 744 SUPERFAMILY Helical domain of Sec23/24 499 615 IPR036175 GO:0006886|GO:0006888|GO:0030127
Accr13g00461 744 Gene3D - 31 102 - -
Accr13g00461 744 Pfam Sec23/Sec24 trunk domain 121 373 IPR006896 GO:0006886|GO:0006888|GO:0030127
Accr13g00461 744 SUPERFAMILY Zn-finger domain of Sec23/24 39 111 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00461 - - cave:132164196 1327.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00461 13 4679441 4685140 Accr13g00461 13 4679441 4685140 ECH