Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00458 ATGGCCAACATCTCAACCATGTTCTCTGCTTCCTCCTCCTTCTTCATTGCCTTATCGCTGCTTCTCACTCTTTCTGATATTTGTCTGCCAATTCGAGGCTCTGAGTTTGGAATAAACTACGGACAAATAGCCAACAATCTCCCATCTCCCACTCGCGTTGCTGGTCTCATAAATTCCCTTAACGTCAGTAGAATCAAACTCTACGATGCCGATCCAAATGTTCTGTCTGCCTTCTCCGGTTCCGATGTTGAGTTCATCATAGGACTAAAAAACGAGGATCTGGGGAACATGACAGACATATCACAAGCACAATCATGGATTCAACAAAATGTTGTCCCCTATCTCTCACAGACCAAAATCTCCACCATTACCGTAGGAAACGAGATTTTCACCAACAACGACACACAACAAAACCAAAACCTCGTCCCTGCAATGAAATCAGTGTACAATGCCCTTGTCAATCTTGGGTTAGATCAAAAAGTTTCTGTTACAAGTGCTCATTCTTTCAATATTTTATCCAATTCTTACCCTCCTTCCTCTGGAGCTTTTAGGGAAGATCTGATTCCATATATCCAACCCCTTTTGAGTTTTCATGCTCAAGTGAAATCCCCTTTTCTGATTAATGCATATCCATTTTTTGCCTACAAGGGAAGCCCCAGTGAGATTTCATTAAACTATGTCCTGTTTCAGCCAAACGCAGGAATGGTCGATCCAAACACAAATCTTCATTATGATAACATGCTTTATGCTCAGGTTGATGCTGTGTACGCAGCGATTAAAGCATTGGGTCACAGTGATATTGAGGTTAAGATTTCTGAGACAGGTTGGCCTTCTAAAGGTGATGCCGATGAAGTTGGAGCTTCACTTGAAAATGCAATGTTGTATAATGGGAATTTGTTGAAGAGGATGGAGATGAAAGAGGGGACTCCTGCAAAACCTTCGGTTCCTATTGATATCTATGTGTTTGCACTTTTCAACGAAAATATGAAACCTGGTCCTACTTCTGAGAGGAACTATGGTCTCTATTATCCAGATGGTACTCCTGTTTATGATGCTGGATTACAAGGTCGTTTACCAAAGATGGTGGTTGAATCTGCATCCAAGTCCAACGGCTTGTTCGTGGGTTATCTTGTGTATGTCATTACATGTTTAGTTTTAGTTTTTGAGATTTCAAGGTGGTGA 1182 0.4137 MANISTMFSASSSFFIALSLLLTLSDICLPIRGSEFGINYGQIANNLPSPTRVAGLINSLNVSRIKLYDADPNVLSAFSGSDVEFIIGLKNEDLGNMTDISQAQSWIQQNVVPYLSQTKISTITVGNEIFTNNDTQQNQNLVPAMKSVYNALVNLGLDQKVSVTSAHSFNILSNSYPPSSGAFREDLIPYIQPLLSFHAQVKSPFLINAYPFFAYKGSPSEISLNYVLFQPNAGMVDPNTNLHYDNMLYAQVDAVYAAIKALGHSDIEVKISETGWPSKGDADEVGASLENAMLYNGNLLKRMEMKEGTPAKPSVPIDIYVFALFNENMKPGPTSERNYGLYYPDGTPVYDAGLQGRLPKMVVESASKSNGLFVGYLVYVITCLVLVFEISRW 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00458 393 SUPERFAMILY (Trans)glycosidases 36 352 IPR017853 -
Accr13g00458 393 Gene3D Glycosidases 35 359 - -
Accr13g00458 393 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 23 355 IPR044965 GO:0004553|GO:0005975
Accr13g00458 393 FunFam Glucan endo-1,3-beta-glucosidase 14 34 359 - -
Accr13g00458 393 Pfam Glycosyl hydrolases family 17 37 351 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00458 Accr-Chr13 4661895 4663650 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00458 86 369 Glycoside Hydrolase AT2G27500 68.772 1.88e-148 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00458 - - gmx:100786020 583.948