Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00420 ATGATACTAGTATCACCTTCCTCCGTTTCAGATCTTCGTACTCATAATTCCCTCTACAACAAACCTAGCTTCTTCCCTACTCTCGCCAGACTAAGTCCTCGCTGTTTCATCGCTCCTCGATGCTCTTCTAGCGTGCAGGAGATTGAGAAATCCTCTAGCCCCTCCGATGACAGACAATTGAGTTCGGAGCTCTATGCTTCAGCCCCATTCCCTCCCGTCAAGGTCGCCAAGAGAGTTGTGTTGGTCAGGCATGGCCAGAGCACCTGGAATGCCGAAGGCAGGATCCAAGGGAGCTCCAATTTCTCGGTGCTTACTAAGAAGGGTGAGGCTCAGGCCGAGACTTCGCGTCAAATGCTCATCGATGATAAGTTCGATGTTTGCTTCTCCAGTCCTTTGGCGCGATCAAAGAGAACGGCAGAAATAATCTGGGAAGCTCGTGAACCGCGGATAATTACAGAATATGATTTGAGGGAAATCGATTTATATTCATTTCAAGGCCTCTTAAAGCACGAGGGGAAAGAAAGATTTGGCCCAGTTTATCGCCAGTGGCAAGTGGATGCGGCAAATTTCATCGTGGATGGTCATTATCCGGTGAGAGAGCTATGGGAACGTGCCAGGAGCAGCTGGGATAAAATCTTAGGTCACGATAGCAGGTCCATTCTTGTGGTTGCTCACAACGCTGTCAATCAGGCTCTTGTTGCCACGGCAATTGGTTTAGGGACAGAGTACTTCAGAACTTTACTTCAGAGCAATTGTGGTGTGAGTGTCCTTGATTTCATCCCAAGATCTGAGGGTGGCTCTCCACATATTTGTCTTAACCGATTAAATCAGACCCCTGGTTCGCCTGTTGCTGGTGGAAAATCTGCAGGTAGAAAGACAAATAAGCAGATAATACTTGTTTGCCATGGTTATACACAGGGCAATGCAGAGGATGGTTTTCTTTTGGCTGGTCATCAACAATTGAATATGCTTGGTCTTATACAGTCCCAGAAATCTGCAGAGCTACTTCTTGATTTGAGAGTGAATTCCATAATTAGCAGTCCTAACAAAGCCTGTATTGGGACAGCAAATGCCATCTCTCAAGTACAAGAAGCCGCTGATTGCTTGGGTGCTGACTGTGTGCCACGCTATGTTGAGATGAAGCAGATGGAGAACCTGGCTGTTGAAACAATCTTTCAGCAATCCAAGGATATATCAAATTTTTCAGCTATTCATCCGGGTTGGTTAAATAAGATCGAGGATGGGGTGAGAACAACATTATGGAATGAATCTGGAAAGGCATGGCAATCCCTGTTAGAAGAACTATCAGATGAAGGATCATCATCAGAAGTTGTGGTTGTAGTTGCCCATCCGGCCATCCACATAGCACTCATGGGGCACTGCTTAAACTTGTCAAAAGAATGGTTTGGATCGTTTCATCTTGATGCCGCTAGTGTGAGTGTCATTGACTTCCCTGATGGACGCAAAGGAAGAGGCGTTATCAGGTGCATAAACTATACTGCTCATTTGGGAAGATGGTCCATACCTATTACAAGATCAACTGAGGATAGCGAAGAGTTCTAA 1563 0.4587 MILVSPSSVSDLRTHNSLYNKPSFFPTLARLSPRCFIAPRCSSSVQEIEKSSSPSDDRQLSSELYASAPFPPVKVAKRVVLVRHGQSTWNAEGRIQGSSNFSVLTKKGEAQAETSRQMLIDDKFDVCFSSPLARSKRTAEIIWEAREPRIITEYDLREIDLYSFQGLLKHEGKERFGPVYRQWQVDAANFIVDGHYPVRELWERARSSWDKILGHDSRSILVVAHNAVNQALVATAIGLGTEYFRTLLQSNCGVSVLDFIPRSEGGSPHICLNRLNQTPGSPVAGGKSAGRKTNKQIILVCHGYTQGNAEDGFLLAGHQQLNMLGLIQSQKSAELLLDLRVNSIISSPNKACIGTANAISQVQEAADCLGADCVPRYVEMKQMENLAVETIFQQSKDISNFSAIHPGWLNKIEDGVRTTLWNESGKAWQSLLEELSDEGSSSEVVVVVAHPAIHIALMGHCLNLSKEWFGSFHLDAASVSVIDFPDGRKGRGVIRCINYTAHLGRWSIPITRSTEDSEEF 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00420 520 FunFam Putative 2-carboxy-D-arabinitol-1-phosphatase 288 507 - -
Accr13g00420 520 SUPERFAMILY Phosphoglycerate mutase-like 77 273 IPR029033 -
Accr13g00420 520 Gene3D - 77 279 IPR029033 -
Accr13g00420 520 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 81 90 IPR001345 GO:0003824
Accr13g00420 520 Gene3D - 287 507 IPR029033 -
Accr13g00420 520 CDD HP_PGM_like 78 259 IPR013078 -
Accr13g00420 520 Pfam Histidine phosphatase superfamily (branch 1) 297 488 IPR013078 -
Accr13g00420 520 Pfam Histidine phosphatase superfamily (branch 1) 79 260 IPR013078 -
Accr13g00420 520 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 293 488 - -
Accr13g00420 520 SUPERFAMILY Phosphoglycerate mutase-like 295 508 IPR029033 -
Accr13g00420 520 SMART PGAM_5 296 457 IPR013078 -
Accr13g00420 520 SMART PGAM_5 78 232 IPR013078 -
Accr13g00420 520 FunFam Phosphoglycerate mutase 77 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00420 Accr-Chr13 4202363 4205815 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00420 K22200 - gmx:100794084 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00420 13 4202363 4205815 Accr13g00420 13 4202363 4205815 ECH